These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

323 related articles for article (PubMed ID: 8710833)

  • 1. Homology modeling by the ICM method.
    Cardozo T; Totrov M; Abagyan R
    Proteins; 1995 Nov; 23(3):403-14. PubMed ID: 8710833
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Selecting near-native conformations in homology modeling: the role of molecular mechanics and solvation terms.
    Janardhan A; Vajda S
    Protein Sci; 1998 Aug; 7(8):1772-80. PubMed ID: 10082374
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Analysis of six protein structures predicted by comparative modeling techniques.
    Harrison RW; Chatterjee D; Weber IT
    Proteins; 1995 Dec; 23(4):463-71. PubMed ID: 8749843
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins.
    Abagyan R; Totrov M
    J Mol Biol; 1994 Jan; 235(3):983-1002. PubMed ID: 8289329
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of comparative protein modeling by MODELLER.
    Sali A; Potterton L; Yuan F; van Vlijmen H; Karplus M
    Proteins; 1995 Nov; 23(3):318-26. PubMed ID: 8710825
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A method to configure protein side-chains from the main-chain trace in homology modelling.
    Eisenmenger F; Argos P; Abagyan R
    J Mol Biol; 1993 Jun; 231(3):849-60. PubMed ID: 8515455
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Ab initio computational modeling of loops in G-protein-coupled receptors: lessons from the crystal structure of rhodopsin.
    Mehler EL; Hassan SA; Kortagere S; Weinstein H
    Proteins; 2006 Aug; 64(3):673-90. PubMed ID: 16729264
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool.
    Bower MJ; Cohen FE; Dunbrack RL
    J Mol Biol; 1997 Apr; 267(5):1268-82. PubMed ID: 9150411
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment.
    Ginalski K; Rychlewski L
    Proteins; 2003; 53 Suppl 6():410-7. PubMed ID: 14579329
    [TBL] [Abstract][Full Text] [Related]  

  • 10. LOOPER: a molecular mechanics-based algorithm for protein loop prediction.
    Spassov VZ; Flook PK; Yan L
    Protein Eng Des Sel; 2008 Feb; 21(2):91-100. PubMed ID: 18194981
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Prediction of protein side-chain conformations from local three-dimensional homology relationships.
    Laughton CA
    J Mol Biol; 1994 Jan; 235(3):1088-97. PubMed ID: 7507173
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Fast and simple Monte Carlo algorithm for side chain optimization in proteins: application to model building by homology.
    Holm L; Sander C
    Proteins; 1992 Oct; 14(2):213-23. PubMed ID: 1409569
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Confronting the problem of interconnected structural changes in the comparative modeling of proteins.
    Samudrala R; Pedersen JT; Zhou HB; Luo R; Fidelis K; Moult J
    Proteins; 1995 Nov; 23(3):327-36. PubMed ID: 8710826
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Homology modeling of histidine-containing phosphocarrier protein and eosinophil-derived neurotoxin: construction of models and comparison with experiment.
    Church WB; Palmer A; Wathey JC; Kitson DH
    Proteins; 1995 Nov; 23(3):422-30. PubMed ID: 8710835
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Protein backbone angle prediction with machine learning approaches.
    Kuang R; Leslie CS; Yang AS
    Bioinformatics; 2004 Jul; 20(10):1612-21. PubMed ID: 14988121
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The use of position-specific rotamers in model building by homology.
    Chinea G; Padron G; Hooft RW; Sander C; Vriend G
    Proteins; 1995 Nov; 23(3):415-21. PubMed ID: 8710834
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A critical assessment of comparative molecular modeling of tertiary structures of proteins.
    Mosimann S; Meleshko R; James MN
    Proteins; 1995 Nov; 23(3):301-17. PubMed ID: 8710824
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Modeling side-chain conformation for homologous proteins using an energy-based rotamer search.
    Wilson C; Gregoret LM; Agard DA
    J Mol Biol; 1993 Feb; 229(4):996-1006. PubMed ID: 8445659
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Prediction and evaluation of side-chain conformations for protein backbone structures.
    Shenkin PS; Farid H; Fetrow JS
    Proteins; 1996 Nov; 26(3):323-52. PubMed ID: 8953653
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Modeling three-dimensional protein structures for amino acid sequences of the CASP3 experiment using sequence-derived predictions.
    Fischer D
    Proteins; 1999; Suppl 3():61-5. PubMed ID: 10526353
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.