These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

59 related articles for article (PubMed ID: 8832376)

  • 1. Pair-preferences: a quantitative measure of regularities in protein sequences.
    Rani M; Mitra CK
    J Biomol Struct Dyn; 1996 Jun; 13(6):935-44. PubMed ID: 8832376
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid.
    Mukherjee A; Bagchi B
    J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287
    [TBL] [Abstract][Full Text] [Related]  

  • 3. NdPASA: a novel pairwise protein sequence alignment algorithm that incorporates neighbor-dependent amino acid propensities.
    Wang J; Feng JA
    Proteins; 2005 Feb; 58(3):628-37. PubMed ID: 15616964
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Intrinsic disorder in the Protein Data Bank.
    Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK
    J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849
    [TBL] [Abstract][Full Text] [Related]  

  • 5. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Potential implications of availability of short amino acid sequences in proteins: an old and new approach to protein decoding and design.
    Otaki JM; Gotoh T; Yamamoto H
    Biotechnol Annu Rev; 2008; 14():109-41. PubMed ID: 18606361
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Accurate prediction for atomic-level protein design and its application in diversifying the near-optimal sequence space.
    Fromer M; Yanover C
    Proteins; 2009 May; 75(3):682-705. PubMed ID: 19003998
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Use of residue pairs in protein sequence-sequence and sequence-structure alignments.
    Jung J; Lee B
    Protein Sci; 2000 Aug; 9(8):1576-88. PubMed ID: 10975579
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Are proteins ideal mixtures of amino acids? Analysis of energy parameter sets.
    Godzik A; Koliński A; Skolnick J
    Protein Sci; 1995 Oct; 4(10):2107-17. PubMed ID: 8535247
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Long-range electrostatic interactions influence the orientation of Fos-Jun binding at AP-1 sites.
    Ramirez-Carrozzi VR; Kerppola TK
    J Mol Biol; 2001 Jan; 305(3):411-27. PubMed ID: 11152600
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations.
    Sippl MJ; Weitckus S
    Proteins; 1992 Jul; 13(3):258-71. PubMed ID: 1603814
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
    Barenboim M; Masso M; Vaisman II; Jamison DC
    Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Representation of amino acid sequences as two-dimensional point patterns.
    Pleissner KP; Wernisch L; Oswald H; Fleck E
    Electrophoresis; 1997 Dec; 18(15):2709-13. PubMed ID: 9504802
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Protein topology recognition from secondary structure sequences: application of the hidden Markov models to the alpha class proteins.
    Di Francesco V; Garnier J; Munson PJ
    J Mol Biol; 1997 Mar; 267(2):446-63. PubMed ID: 9096237
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of protein structure by evaluation of sequence-structure fitness. Aligning sequences to contact profiles derived from three-dimensional structures.
    Ouzounis C; Sander C; Scharf M; Schneider R
    J Mol Biol; 1993 Aug; 232(3):805-25. PubMed ID: 8355272
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A fast method to predict protein interaction sites from sequences.
    Gallet X; Charloteaux B; Thomas A; Brasseur R
    J Mol Biol; 2000 Sep; 302(4):917-26. PubMed ID: 10993732
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Probabilistic description of protein alignments for sequences and structures.
    Koike R; Kinoshita K; Kidera A
    Proteins; 2004 Jul; 56(1):157-66. PubMed ID: 15162495
    [TBL] [Abstract][Full Text] [Related]  

  • 18. De novo protein design. II. Plasticity in sequence space.
    Koehl P; Levitt M
    J Mol Biol; 1999 Nov; 293(5):1183-93. PubMed ID: 10547294
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Residue frequencies and pairing preferences at protein-protein interfaces.
    Glaser F; Steinberg DM; Vakser IA; Ben-Tal N
    Proteins; 2001 May; 43(2):89-102. PubMed ID: 11276079
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of functionally conserved residues with the use of entropy-variability plots.
    Oliveira L; Paiva PB; Paiva AC; Vriend G
    Proteins; 2003 Sep; 52(4):544-52. PubMed ID: 12910454
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 3.