These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

99 related articles for article (PubMed ID: 8865343)

  • 1. Structure model of a complex between the factor for inversion stimulation (FIS) and DNA: modeling protein-DNA complexes with dyad symmetry and known protein structures.
    Sandmann C; Cordes F; Saenger W
    Proteins; 1996 Aug; 25(4):486-500. PubMed ID: 8865343
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts.
    Pan CQ; Finkel SE; Cramton SE; Feng JA; Sigman DS; Johnson RC
    J Mol Biol; 1996 Dec; 264(4):675-95. PubMed ID: 8980678
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Modelling repressor proteins docking to DNA.
    Aloy P; Moont G; Gabb HA; Querol E; Aviles FX; Sternberg MJ
    Proteins; 1998 Dec; 33(4):535-49. PubMed ID: 9849937
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution.
    Albright RA; Matthews BW
    J Mol Biol; 1998 Jul; 280(1):137-51. PubMed ID: 9653037
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Conformational analysis of single-base bulges in A-form DNA and RNA using a hierarchical approach and energetic evaluation with a continuum solvent model.
    Zacharias M; Sklenar H
    J Mol Biol; 1999 Jun; 289(2):261-75. PubMed ID: 10366504
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Structure-based prediction of DNA-binding sites on proteins using the empirical preference of electrostatic potential and the shape of molecular surfaces.
    Tsuchiya Y; Kinoshita K; Nakamura H
    Proteins; 2004 Jun; 55(4):885-94. PubMed ID: 15146487
    [TBL] [Abstract][Full Text] [Related]  

  • 7. NMR structure of the extended Myb cognate sequence and modeling studies on specific DNA-Myb complexes.
    Radha PK; Patel PK; Hosur RV
    Biochemistry; 1998 Jul; 37(28):9952-63. PubMed ID: 9665700
    [TBL] [Abstract][Full Text] [Related]  

  • 8. DNA stretching and compression: large-scale simulations of double helical structures.
    Kosikov KM; Gorin AA; Zhurkin VB; Olson WK
    J Mol Biol; 1999 Jun; 289(5):1301-26. PubMed ID: 10373369
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Solution structure of the first three zinc fingers of TFIIIA bound to the cognate DNA sequence: determinants of affinity and sequence specificity.
    Wuttke DS; Foster MP; Case DA; Gottesfeld JM; Wright PE
    J Mol Biol; 1997 Oct; 273(1):183-206. PubMed ID: 9367756
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The NMR solution structure of a mutant of the Max b/HLH/LZ free of DNA: insights into the specific and reversible DNA binding mechanism of dimeric transcription factors.
    Sauvé S; Tremblay L; Lavigne P
    J Mol Biol; 2004 Sep; 342(3):813-32. PubMed ID: 15342239
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Conformational changes of the upstream DNA mediated by H-NS and FIS regulate E. coli RrnB P1 promoter activity.
    Afflerbach H; Schröder O; Wagner R
    J Mol Biol; 1999 Feb; 286(2):339-53. PubMed ID: 9973555
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Arc repressor-operator DNA interactions and contribution of Phe10 to binding specificity.
    Dostál L; Misselwitz R; Welfle H
    Biochemistry; 2005 Jun; 44(23):8387-96. PubMed ID: 15938628
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A-form conformational motifs in ligand-bound DNA structures.
    Lu XJ; Shakked Z; Olson WK
    J Mol Biol; 2000 Jul; 300(4):819-40. PubMed ID: 10891271
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The solution structure of the Sac7d/DNA complex: a small-angle X-ray scattering study.
    Krueger JK; McCrary BS; Wang AH; Shriver JW; Trewhella J; Edmondson SP
    Biochemistry; 1999 Aug; 38(32):10247-55. PubMed ID: 10441118
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Structural basis for SRY-dependent 46-X,Y sex reversal: modulation of DNA bending by a naturally occurring point mutation.
    Murphy EC; Zhurkin VB; Louis JM; Cornilescu G; Clore GM
    J Mol Biol; 2001 Sep; 312(3):481-99. PubMed ID: 11563911
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular dynamics simulations of B '-DNA: sequence effects on A-tract-induced bending and flexibility.
    McConnell KJ; Beveridge DL
    J Mol Biol; 2001 Nov; 314(1):23-40. PubMed ID: 11724529
    [TBL] [Abstract][Full Text] [Related]  

  • 17. [Theoretical approaches for evaluation of DNA-protein interactions].
    Vasil'ev SA; Alekseevskiĭ AV; Spirin SA; Tashlitskiĭ VN; Kariagina AS
    Biofizika; 2001; 46(6):1010-21. PubMed ID: 11771274
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Structure-based prediction of DNA target sites by regulatory proteins.
    Kono H; Sarai A
    Proteins; 1999 Apr; 35(1):114-31. PubMed ID: 10090291
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Do water molecules mediate protein-DNA recognition?
    Reddy CK; Das A; Jayaram B
    J Mol Biol; 2001 Nov; 314(3):619-32. PubMed ID: 11846571
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A-Tract bending: insights into experimental structures by computational models.
    Strahs D; Schlick T
    J Mol Biol; 2000 Aug; 301(3):643-63. PubMed ID: 10966775
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.