These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

69 related articles for article (PubMed ID: 9109037)

  • 1. Score distributions for simultaneous matching to multiple motifs.
    Bailey TL; Gribskov M
    J Comput Biol; 1997; 4(1):45-59. PubMed ID: 9109037
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Methods and statistics for combining motif match scores.
    Bailey TL; Gribskov M
    J Comput Biol; 1998; 5(2):211-21. PubMed ID: 9672829
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Statistical models for protein validation using tandem mass spectral data and protein amino acid sequence databases.
    Sadygov RG; Liu H; Yates JR
    Anal Chem; 2004 Mar; 76(6):1664-71. PubMed ID: 15018565
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Calibrating E-values for hidden Markov models using reverse-sequence null models.
    Karplus K; Karchin R; Shackelford G; Hughey R
    Bioinformatics; 2005 Nov; 21(22):4107-15. PubMed ID: 16123115
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The value of prior knowledge in discovering motifs with MEME.
    Bailey TL; Elkan C
    Proc Int Conf Intell Syst Mol Biol; 1995; 3():21-9. PubMed ID: 7584439
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Convergent Island Statistics: a fast method for determining local alignment score significance.
    Poleksic A; Danzer JF; Hambly K; Debe DA
    Bioinformatics; 2005 Jun; 21(12):2827-31. PubMed ID: 15817690
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Relation between weight matrix and substitution matrix: motif search by similarity.
    Zheng WM
    Bioinformatics; 2005 Apr; 21(7):938-43. PubMed ID: 15514002
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A computational strategy for the prediction of functional linear peptide motifs in proteins.
    Dinkel H; Sticht H
    Bioinformatics; 2007 Dec; 23(24):3297-303. PubMed ID: 17977881
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Empirical statistical estimates for sequence similarity searches.
    Pearson WR
    J Mol Biol; 1998 Feb; 276(1):71-84. PubMed ID: 9514730
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Some useful statistical properties of position-weight matrices.
    Claverie JM
    Comput Chem; 1994 Sep; 18(3):287-94. PubMed ID: 7952899
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ARCS-Motif: discovering correlated motifs from unaligned biological sequences.
    Zhang S; Su W; Yang J
    Bioinformatics; 2009 Jan; 25(2):183-9. PubMed ID: 19073591
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Local sequence alignments statistics: deviations from Gumbel statistics in the rare-event tail.
    Wolfsheimer S; Burghardt B; Hartmann AK
    Algorithms Mol Biol; 2007 Jul; 2():9. PubMed ID: 17625018
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Computing the P-value of the information content from an alignment of multiple sequences.
    Nagarajan N; Jones N; Keich U
    Bioinformatics; 2005 Jun; 21 Suppl 1():i311-8. PubMed ID: 15961473
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Finding motifs with insufficient number of strong binding sites.
    Leung HC; Chin FY; Yiu SM; Rosenfeld R; Tsang WW
    J Comput Biol; 2005; 12(6):686-701. PubMed ID: 16108711
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated proteins.
    Davey NE; Edwards RJ; Shields DC
    BMC Bioinformatics; 2010 Jan; 11():14. PubMed ID: 20055997
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Identifying bacterial and archaeal homologs of pentameric ligand-gated ion channel (pLGIC) family using domain-based and alignment-based approaches.
    Rendon G; Kantorovitz MR; Tilson JL; Jakobsson E
    Channels (Austin); 2011; 5(4):325-43. PubMed ID: 21918370
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Estimating and evaluating the statistics of gapped local-alignment scores.
    Bailey TL; Gribskov M
    J Comput Biol; 2002; 9(3):575-93. PubMed ID: 12162893
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Hidden Markov model analysis of motifs in steroid dehydrogenases and their homologs.
    Grundy WN; Bailey TL; Elkan CP; Baker ME
    Biochem Biophys Res Commun; 1997 Feb; 231(3):760-6. PubMed ID: 9070888
    [TBL] [Abstract][Full Text] [Related]  

  • 19. iGibbs: improving Gibbs motif sampler for proteins by sequence clustering and iterative pattern sampling.
    Kim S; Wang Z; Dalkilic M
    Proteins; 2007 Feb; 66(3):671-81. PubMed ID: 17120229
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Statistical distributions of optimal global alignment scores of random protein sequences.
    Pang H; Tang J; Chen SS; Tao S
    BMC Bioinformatics; 2005 Oct; 6():257. PubMed ID: 16225696
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 4.