102 related articles for article (PubMed ID: 9242594)
1. Hadamard conjugations and modeling sequence evolution with unequal rates across sites.
Waddell PJ; Penny D; Moore T
Mol Phylogenet Evol; 1997 Aug; 8(1):33-50. PubMed ID: 9242594
[TBL] [Abstract][Full Text] [Related]
2. Taking variation of evolutionary rates between sites into account in inferring phylogenies.
Felsenstein J
J Mol Evol; 2001; 53(4-5):447-55. PubMed ID: 11675604
[TBL] [Abstract][Full Text] [Related]
3. Is homoplasy or lineage sorting the source of incongruent mtdna and nuclear gene trees in the stiff-tailed ducks (Nomonyx-Oxyura)?
McCracken K; Sorenson M
Syst Biol; 2005 Feb; 54(1):35-55. PubMed ID: 15805009
[TBL] [Abstract][Full Text] [Related]
4. Estimating the distribution of selection coefficients from phylogenetic data with applications to mitochondrial and viral DNA.
Nielsen R; Yang Z
Mol Biol Evol; 2003 Aug; 20(8):1231-9. PubMed ID: 12777508
[TBL] [Abstract][Full Text] [Related]
5. General time-reversible distances with unequal rates across sites: mixing gamma and inverse Gaussian distributions with invariant sites.
Waddell PJ; Steel MA
Mol Phylogenet Evol; 1997 Dec; 8(3):398-414. PubMed ID: 9417897
[TBL] [Abstract][Full Text] [Related]
6. Testing for covarion-like evolution in protein sequences.
Wang HC; Spencer M; Susko E; Roger AJ
Mol Biol Evol; 2007 Jan; 24(1):294-305. PubMed ID: 17056642
[TBL] [Abstract][Full Text] [Related]
7. A simple hierarchical approach to modeling distributions of substitution rates.
Pond SL; Frost SD
Mol Biol Evol; 2005 Feb; 22(2):223-34. PubMed ID: 15483327
[TBL] [Abstract][Full Text] [Related]
8. A dirichlet process covarion mixture model and its assessments using posterior predictive discrepancy tests.
Zhou Y; Brinkmann H; Rodrigue N; Lartillot N; Philippe H
Mol Biol Evol; 2010 Feb; 27(2):371-84. PubMed ID: 19822637
[TBL] [Abstract][Full Text] [Related]
9. Variation in modes and rates of evolution in nuclear and mitochondrial ribosomal DNA in the mushroom genus Amanita (Agaricales, Basidiomycota): phylogenetic implications.
Moncalvo JM; Drehmel D; Vilgalys R
Mol Phylogenet Evol; 2000 Jul; 16(1):48-63. PubMed ID: 10877939
[TBL] [Abstract][Full Text] [Related]
10. Measuring the fit of sequence data to phylogenetic model: allowing for missing data.
Waddell PJ
Mol Biol Evol; 2005 Mar; 22(3):395-401. PubMed ID: 15470228
[TBL] [Abstract][Full Text] [Related]
11. Longevity and the evolution of the mitochondrial DNA-coded proteins in mammals.
Rottenberg H
Mech Ageing Dev; 2006 Sep; 127(9):748-60. PubMed ID: 16876233
[TBL] [Abstract][Full Text] [Related]
12. Inferring complex DNA substitution processes on phylogenies using uniformization and data augmentation.
Mateiu L; Rannala B
Syst Biol; 2006 Apr; 55(2):259-69. PubMed ID: 16551582
[TBL] [Abstract][Full Text] [Related]
13. Mathematical elegance with biochemical realism: the covarion model of molecular evolution.
Penny D; McComish BJ; Charleston MA; Hendy MD
J Mol Evol; 2001 Dec; 53(6):711-23. PubMed ID: 11677631
[TBL] [Abstract][Full Text] [Related]
14. Systematics of the lizard family pygopodidae with implications for the diversification of Australian temperate biotas.
Jennings WB; Pianka ER; Donnellan S
Syst Biol; 2003 Dec; 52(6):757-80. PubMed ID: 14668116
[TBL] [Abstract][Full Text] [Related]
15. A gamma mixture model better accounts for among site rate heterogeneity.
Mayrose I; Friedman N; Pupko T
Bioinformatics; 2005 Sep; 21 Suppl 2():ii151-8. PubMed ID: 16204095
[TBL] [Abstract][Full Text] [Related]
16. Difficulties in testing for covarion-like properties of sequences under the confounding influence of changing proportions of variable sites.
Gruenheit N; Lockhart PJ; Steel M; Martin W
Mol Biol Evol; 2008 Jul; 25(7):1512-20. PubMed ID: 18424773
[TBL] [Abstract][Full Text] [Related]
17. Evolution of the RNA polymerase B' subunit gene (rpoB') in Halobacteriales: a complementary molecular marker to the SSU rRNA gene.
Walsh DA; Bapteste E; Kamekura M; Doolittle WF
Mol Biol Evol; 2004 Dec; 21(12):2340-51. PubMed ID: 15356285
[TBL] [Abstract][Full Text] [Related]
18. Artifactual phylogenies caused by correlated distribution of substitution rates among sites and lineages: the good, the bad, and the ugly.
Ruano-Rubio V; Fares MA
Syst Biol; 2007 Feb; 56(1):68-82. PubMed ID: 17366138
[TBL] [Abstract][Full Text] [Related]
19. Empirical models for substitution in ribosomal RNA.
Smith AD; Lui TW; Tillier ER
Mol Biol Evol; 2004 Mar; 21(3):419-27. PubMed ID: 14660689
[TBL] [Abstract][Full Text] [Related]
20. Evolutionary model selection with a genetic algorithm: a case study using stem RNA.
Kosakovsky Pond SL; Mannino FV; Gravenor MB; Muse SV; Frost SD
Mol Biol Evol; 2007 Jan; 24(1):159-70. PubMed ID: 17038448
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
