106 related articles for article (PubMed ID: 9278064)
1. Aligning a DNA sequence with a protein sequence.
Zhang Z; Pearson WR; Miller W
J Comput Biol; 1997; 4(3):339-49. PubMed ID: 9278064
[TBL] [Abstract][Full Text] [Related]
2. Computing multiple sequence/structure alignments with the T-coffee package.
Notredame C; Suhre K
Curr Protoc Bioinformatics; 2004 Feb; Chapter 3():Unit3.8. PubMed ID: 18428722
[TBL] [Abstract][Full Text] [Related]
3. A greedy algorithm for aligning DNA sequences.
Zhang Z; Schwartz S; Wagner L; Miller W
J Comput Biol; 2000; 7(1-2):203-14. PubMed ID: 10890397
[TBL] [Abstract][Full Text] [Related]
4. Filtering redundancies for sequence similarity search programs.
Cantalloube H; Chomilier J; Chiusa S; Lonquety M; Spadoni JL; Zagury JF
J Biomol Struct Dyn; 2005 Feb; 22(4):487-92. PubMed ID: 15588112
[TBL] [Abstract][Full Text] [Related]
5. Finding protein and nucleotide similarities with FASTA.
Pearson W
Curr Protoc Bioinformatics; 2004 Feb; Chapter 3():Unit3.9. PubMed ID: 18428723
[TBL] [Abstract][Full Text] [Related]
6. A tool for analyzing and annotating genomic sequences.
Huang X; Adams MD; Zhou H; Kerlavage AR
Genomics; 1997 Nov; 46(1):37-45. PubMed ID: 9403056
[TBL] [Abstract][Full Text] [Related]
7. Finding homologs to nucleic acid or protein sequences using the framesearch program.
Healy M
Curr Protoc Bioinformatics; 2002 Aug; Chapter 3():Unit 3.2. PubMed ID: 18792937
[TBL] [Abstract][Full Text] [Related]
8. Comparison of DNA sequences with protein sequences.
Pearson WR; Wood T; Zhang Z; Miller W
Genomics; 1997 Nov; 46(1):24-36. PubMed ID: 9403055
[TBL] [Abstract][Full Text] [Related]
9. Using the FASTA program to search protein and DNA sequence databases.
Pearson WR
Methods Mol Biol; 1994; 25():365-89. PubMed ID: 8004177
[No Abstract] [Full Text] [Related]
10. Domain identification by clustering sequence alignments.
Guan X
Proc Int Conf Intell Syst Mol Biol; 1997; 5():124-30. PubMed ID: 9322026
[TBL] [Abstract][Full Text] [Related]
11. transAlign: using amino acids to facilitate the multiple alignment of protein-coding DNA sequences.
Bininda-Emonds OR
BMC Bioinformatics; 2005 Jun; 6():156. PubMed ID: 15969769
[TBL] [Abstract][Full Text] [Related]
12. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
[TBL] [Abstract][Full Text] [Related]
13. Dynamic programming algorithms for biological sequence comparison.
Pearson WR; Miller W
Methods Enzymol; 1992; 210():575-601. PubMed ID: 1584052
[TBL] [Abstract][Full Text] [Related]
14. Database similarity searches.
Plewniak F
Methods Mol Biol; 2008; 484():361-78. PubMed ID: 18592192
[TBL] [Abstract][Full Text] [Related]
15. Alignments of DNA and protein sequences containing frameshift errors.
Guan X; Uberbacher EC
Comput Appl Biosci; 1996 Feb; 12(1):31-40. PubMed ID: 8670617
[TBL] [Abstract][Full Text] [Related]
16. FASTA-SWAP and FASTA-PAT: pattern database searches using combinations of aligned amino acids, and a novel scoring theory.
Ladunga I; Wiese BA; Smith RF
J Mol Biol; 1996 Jun; 259(4):840-54. PubMed ID: 8683587
[TBL] [Abstract][Full Text] [Related]
17. MacVector: aligning sequences.
Olson SA
Methods Mol Biol; 1994; 25():203-14. PubMed ID: 8004166
[No Abstract] [Full Text] [Related]
18. Dynamite: a flexible code generating language for dynamic programming methods used in sequence comparison.
Birney E; Durbin R
Proc Int Conf Intell Syst Mol Biol; 1997; 5():56-64. PubMed ID: 9322016
[TBL] [Abstract][Full Text] [Related]
19. Multiple sequence alignment based on profile alignment of intermediate sequences.
Lu Y; Sze SH
J Comput Biol; 2008 Sep; 15(7):767-77. PubMed ID: 18662101
[TBL] [Abstract][Full Text] [Related]
20. Multiple sequence alignments.
Wallace IM; Blackshields G; Higgins DG
Curr Opin Struct Biol; 2005 Jun; 15(3):261-6. PubMed ID: 15963889
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]