These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

193 related articles for article (PubMed ID: 9341112)

  • 1. Involvement of a specific metal ion in the transition of the hammerhead ribozyme to its catalytic conformation.
    Peracchi A; Beigelman L; Scott EC; Uhlenbeck OC; Herschlag D
    J Biol Chem; 1997 Oct; 272(43):26822-6. PubMed ID: 9341112
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of the hammerhead ribozyme metal ion binding site responsible for rescue of the deleterious effect of a cleavage site phosphorothioate.
    Wang S; Karbstein K; Peracchi A; Beigelman L; Herschlag D
    Biochemistry; 1999 Oct; 38(43):14363-78. PubMed ID: 10572011
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Significant activity of a modified ribozyme with N7-deazaguanine at g10.1: the double-metal-ion mechanism of catalysis in reactions catalysed by hammerhead ribozymes.
    Nakamatsu Y; Warashina M; Kuwabara T; Tanaka Y; Yoshinari K; Taira K
    Genes Cells; 2000 Aug; 5(8):603-12. PubMed ID: 10947846
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A reappraisal, based on (31)P NMR, of the direct coordination of a metal ion with the phosphoryl oxygen at the cleavage site of a hammerhead ribozyme.
    Suzumura K; Yoshinari K; Tanaka Y; Takagi Y; Kasai Y; Warashina M; Kuwabara T; Orita M; Taira K
    J Am Chem Soc; 2002 Jul; 124(28):8230-6. PubMed ID: 12105900
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A re-investigation of the thio effect at the hammerhead cleavage site.
    Scott EC; Uhlenbeck OC
    Nucleic Acids Res; 1999 Jan; 27(2):479-84. PubMed ID: 9862968
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Role of metal ions in the hydrolysis reaction catalyzed by RNase P RNA from Bacillus subtilis.
    Warnecke JM; Held R; Busch S; Hartmann RK
    J Mol Biol; 1999 Jul; 290(2):433-45. PubMed ID: 10390342
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Activities and relative affinities of divalent metals in unmodified and phosphorothioate-substituted hammerhead ribozymes.
    Hunsicker LM; DeRose VJ
    J Inorg Biochem; 2000 Jul; 80(3-4):271-81. PubMed ID: 11001099
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Effects of phosphorothioate and 2-amino groups in hammerhead ribozymes on cleavage rates and Mg2+ binding.
    Koizumi M; Ohtsuka E
    Biochemistry; 1991 May; 30(21):5145-50. PubMed ID: 2036380
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Helix P4 is a divalent metal ion binding site in the conserved core of the ribonuclease P ribozyme.
    Christian EL; Kaye NM; Harris ME
    RNA; 2000 Apr; 6(4):511-9. PubMed ID: 10786842
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Ribonuclease P (RNase P) RNA is converted to a Cd(2+)-ribozyme by a single Rp-phosphorothioate modification in the precursor tRNA at the RNase P cleavage site.
    Warnecke JM; Fürste JP; Hardt WD; Erdmann VA; Hartmann RK
    Proc Natl Acad Sci U S A; 1996 Aug; 93(17):8924-8. PubMed ID: 8799129
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Hammerhead cleavage of the phosphorodithioate linkage.
    Derrick WB; Greef CH; Caruthers MH; Uhlenbeck OC
    Biochemistry; 2000 Apr; 39(16):4947-54. PubMed ID: 10769154
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Action of metal ions directly involved in the cleavage reaction of hammerhead ribozymes.
    Nakamatsu Y; Warashina M; Kuwabara T; Tanaka Y; Shibata A; Yoshinari K; Taira K
    Nucleic Acids Symp Ser; 1999; (42):283-4. PubMed ID: 10780490
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.
    Mir A; Chen J; Robinson K; Lendy E; Goodman J; Neau D; Golden BL
    Biochemistry; 2015 Oct; 54(41):6369-81. PubMed ID: 26398724
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Configurationally defined phosphorothioate-containing oligoribonucleotides in the study of the mechanism of cleavage of hammerhead ribozymes.
    Slim G; Gait MJ
    Nucleic Acids Res; 1991 Mar; 19(6):1183-8. PubMed ID: 1709484
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Ion-induced folding of the hammerhead ribozyme: a fluorescence resonance energy transfer study.
    Bassi GS; Murchie AI; Walter F; Clegg RM; Lilley DM
    EMBO J; 1997 Dec; 16(24):7481-9. PubMed ID: 9405376
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Magnesium binding sites of the active conformation pf Hammerhead ribozyme.
    Amano M
    Nucleic Acids Symp Ser (Oxf); 2007; (51):385-6. PubMed ID: 18029748
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Crystallographic structures of the hammerhead ribozyme: relationship to ribozyme folding and catalysis.
    Wedekind JE; McKay DB
    Annu Rev Biophys Biomol Struct; 1998; 27():475-502. PubMed ID: 9646875
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Ribozyme-mediated cleavage of a substrate analogue containing an internucleotide-bridging 5'-phosphorothioate: evidence for the single-metal model.
    Kuimelis RG; McLaughlin LW
    Biochemistry; 1996 Apr; 35(16):5308-17. PubMed ID: 8611518
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Existence of efficient divalent metal ion-catalyzed and inefficient divalent metal ion-independent channels in reactions catalyzed by a hammerhead ribozyme.
    Zhou JM; Zhou DM; Takagi Y; Kasai Y; Inoue A; Baba T; Taira K
    Nucleic Acids Res; 2002 Jun; 30(11):2374-82. PubMed ID: 12034824
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Significant change in the structure of a ribozyme upon introduction of a phosphorothioate linkage at P9: NMR reveals a conformational fluctuation in the core region of a hammerhead ribozyme.
    Suzumura K; Warashina M; Yoshinari K; Tanaka Y; Kuwabara T; Orita M; Taira K
    FEBS Lett; 2000 May; 473(1):106-12. PubMed ID: 10802069
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.