150 related articles for article (PubMed ID: 9491346)
1. Design of stapled DNA-minor-groove-binding molecules with a mutable atom simulated annealing method.
Walker WL; Kopka ML; Dickerson RE; Goodsell DS
J Comput Aided Mol Des; 1997 Nov; 11(6):539-46. PubMed ID: 9491346
[TBL] [Abstract][Full Text] [Related]
2. Configurational entropy change of netropsin and distamycin upon DNA minor-groove binding.
Dolenc J; Baron R; Oostenbrink C; Koller J; van Gunsteren WF
Biophys J; 2006 Aug; 91(4):1460-70. PubMed ID: 16731550
[TBL] [Abstract][Full Text] [Related]
3. Molecular dynamics simulations and free energy calculations of netropsin and distamycin binding to an AAAAA DNA binding site.
Dolenc J; Oostenbrink C; Koller J; van Gunsteren WF
Nucleic Acids Res; 2005; 33(2):725-33. PubMed ID: 15687382
[TBL] [Abstract][Full Text] [Related]
4. Molecular modelling of the interaction of carbocyclic analogues of netropsin and distamycin with d(CGCGAATTCGCG)2.
Bielawski K; Bielawska A; Bartulewicz D; Rózański A
Acta Biochim Pol; 2000; 47(3):855-66. PubMed ID: 11310985
[TBL] [Abstract][Full Text] [Related]
5. Antiparallel side-by-side dimeric motif for sequence-specific recognition in the minor groove of DNA by the designed peptide 1-methylimidazole-2-carboxamide netropsin.
Mrksich M; Wade WS; Dwyer TJ; Geierstanger BH; Wemmer DE; Dervan PB
Proc Natl Acad Sci U S A; 1992 Aug; 89(16):7586-90. PubMed ID: 1323845
[TBL] [Abstract][Full Text] [Related]
6. The binding of prototype lexitropsins to the minor groove of DNA: quantum chemical studies.
Mazurek P; Feng W; Shukla K; Sapse AM; Lown JW
J Biomol Struct Dyn; 1991 Oct; 9(2):299-313. PubMed ID: 1660279
[TBL] [Abstract][Full Text] [Related]
7. Carbocyclic analogues of lexitropsin--DNA affinity and endonuclease inhibition.
Pućkowska A; Drozdowska D; Midura-Nowaczek K
Acta Pol Pharm; 2007; 64(2):115-9. PubMed ID: 17665860
[TBL] [Abstract][Full Text] [Related]
8. Sequence recognition of DNA by lexitropsins.
Goodsell DS
Curr Med Chem; 2001 Apr; 8(5):509-16. PubMed ID: 11281838
[TBL] [Abstract][Full Text] [Related]
9. DNA sequence recognition by bis-linked netropsin and distamycin derivatives.
Grokhovsky SL; Surovaya AN; Burckhardt G; Pismensky VF; Chernov BK; Zimmer C; Gursky GV
FEBS Lett; 1998 Nov; 439(3):346-50. PubMed ID: 9845351
[TBL] [Abstract][Full Text] [Related]
10. DNA sequence preferences of several AT-selective minor groove binding ligands.
Abu-Daya A; Brown PM; Fox KR
Nucleic Acids Res; 1995 Sep; 23(17):3385-92. PubMed ID: 7567447
[TBL] [Abstract][Full Text] [Related]
11. Synthetic analogues of netropsin and distamycin. III. Synthesis of a pyridine analogue of the pyrrolecarboxamide antitumour antibiotics.
Bielawski K; Bartulewicz D; Krajewska D; Rózański A
Rocz Akad Med Bialymst; 1996; 41(2):293-304. PubMed ID: 9020541
[TBL] [Abstract][Full Text] [Related]
12. Synthetic analogues of netropsin and distamycin. I. Pyridine-containing analogues of distamycin--a molecular modelling study.
Bielawski K; Bartulewicz D; Rózański A
Rocz Akad Med Bialymst; 1995; 40(2):352-63. PubMed ID: 8834619
[TBL] [Abstract][Full Text] [Related]
13. Molecular dynamics simulations shed light on the enthalpic and entropic driving forces that govern the sequence specific recognition between netropsin and DNA.
Dolenc J; Gerster S; van Gunsteren WF
J Phys Chem B; 2010 Sep; 114(34):11164-72. PubMed ID: 20690690
[TBL] [Abstract][Full Text] [Related]
14. Molecular recognition between oligopeptides and nucleic acids: DNA sequence specificity and binding properties of thiazole-lexitropsins incorporating the concepts of base site acceptance and avoidance.
Rao KE; Shea RG; Yadagiri B; Lown JW
Anticancer Drug Des; 1990 Feb; 5(1):3-20. PubMed ID: 2156516
[TBL] [Abstract][Full Text] [Related]
15. Estimation of the DNA sequence discriminatory ability of hairpin-linked lexitropsins.
Walker WL; Landaw EM; Dickerson RE; Goodsell DS
Proc Natl Acad Sci U S A; 1997 May; 94(11):5634-9. PubMed ID: 9159124
[TBL] [Abstract][Full Text] [Related]
16. Interaction of distamycin A and netropsin with quadruplex and duplex structures: a comparative 1H-NMR study.
Randazzo A; Galeone A; Esposito V; Varra M; Mayol L
Nucleosides Nucleotides Nucleic Acids; 2002; 21(8-9):535-45. PubMed ID: 12484449
[TBL] [Abstract][Full Text] [Related]
17. Progress in the design of DNA sequence-specific lexitropsins.
Walker WL; Kopka ML; Goodsell DS
Biopolymers; 1997; 44(4):323-34. PubMed ID: 9782774
[TBL] [Abstract][Full Text] [Related]
18. Binding affinities of synthetic peptides, pyridine-2-carboxamidonetropsin and 1-methylimidazole-2-carboxamidonetropsin, that form 2:1 complexes in the minor groove of double-helical DNA.
Wade WS; Mrksich M; Dervan PB
Biochemistry; 1993 Oct; 32(42):11385-9. PubMed ID: 8218203
[TBL] [Abstract][Full Text] [Related]
19. Design of sequence-specific DNA binding ligands that use a two-stranded peptide motif for DNA sequence recognition.
Nikolaev VA; Grokhovsky SL; Surovaya AN; Leinsoo TA; Sidorova NYu ; Zasedatelev AS; Zhuze AL; Strahan GA; Shafer RH; Gursky GV
J Biomol Struct Dyn; 1996 Aug; 14(1):31-47. PubMed ID: 8877560
[TBL] [Abstract][Full Text] [Related]
20. Structural and dynamic characterization of the heterodimeric and homodimeric complexes of distamycin and 1-methylimidazole-2-carboxamide-netropsin bound to the minor groove of DNA.
Geierstanger BH; Jacobsen JP; Mrksich M; Dervan PB; Wemmer DE
Biochemistry; 1994 Mar; 33(10):3055-62. PubMed ID: 8130219
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
