277 related articles for article (PubMed ID: 9512464)
21. Mismatch-induced conformational distortions in polymerase beta support an induced-fit mechanism for fidelity.
Arora K; Beard WA; Wilson SH; Schlick T
Biochemistry; 2005 Oct; 44(40):13328-41. PubMed ID: 16201758
[TBL] [Abstract][Full Text] [Related]
22. DNA Polymerase β Cancer-Associated Variant I260M Exhibits Nonspecific Selectivity toward the β-γ Bridging Group of the Incoming dNTP.
Alnajjar KS; Negahbani A; Nakhjiri M; Krylov IS; Kashemirov BA; McKenna CE; Goodman MF; Sweasy JB
Biochemistry; 2017 Oct; 56(40):5449-5456. PubMed ID: 28862868
[TBL] [Abstract][Full Text] [Related]
23. Modifying the beta,gamma leaving-group bridging oxygen alters nucleotide incorporation efficiency, fidelity, and the catalytic mechanism of DNA polymerase beta.
Sucato CA; Upton TG; Kashemirov BA; Batra VK; Martínek V; Xiang Y; Beard WA; Pedersen LC; Wilson SH; McKenna CE; Florián J; Warshel A; Goodman MF
Biochemistry; 2007 Jan; 46(2):461-71. PubMed ID: 17209556
[TBL] [Abstract][Full Text] [Related]
24. Mechanism of DNA polymerization catalyzed by Sulfolobus solfataricus P2 DNA polymerase IV.
Fiala KA; Suo Z
Biochemistry; 2004 Feb; 43(7):2116-25. PubMed ID: 14967051
[TBL] [Abstract][Full Text] [Related]
25. Tertiary conformation of the template-primer and gapped DNA substrates in complexes with rat polymerase beta. Fluorescence energy transfer studies using the multiple donor-acceptor approach.
Jezewska MJ; Galletto R; Bujalowski W
Biochemistry; 2003 Oct; 42(40):11864-78. PubMed ID: 14529299
[TBL] [Abstract][Full Text] [Related]
26. Modifying the Basicity of the dNTP Leaving Group Modulates Precatalytic Conformational Changes of DNA Polymerase β.
Alnajjar KS; Wang K; Alvarado-Cruz I; Chavira C; Negahbani A; Nakhjiri M; Minard C; Garcia-Barboza B; Kashemirov BA; McKenna CE; Goodman MF; Sweasy JB
Biochemistry; 2024 Jun; 63(11):1412-1422. PubMed ID: 38780930
[TBL] [Abstract][Full Text] [Related]
27. Minor groove interactions at the DNA polymerase beta active site modulate single-base deletion error rates.
Osheroff WP; Beard WA; Yin S; Wilson SH; Kunkel TA
J Biol Chem; 2000 Sep; 275(36):28033-8. PubMed ID: 10851238
[TBL] [Abstract][Full Text] [Related]
28. Loop 1 modulates the fidelity of DNA polymerase lambda.
Bebenek K; Garcia-Diaz M; Zhou RZ; Povirk LF; Kunkel TA
Nucleic Acids Res; 2010 Sep; 38(16):5419-31. PubMed ID: 20435673
[TBL] [Abstract][Full Text] [Related]
29. Conformational changes during normal and error-prone incorporation of nucleotides by a Y-family DNA polymerase detected by 2-aminopurine fluorescence.
DeLucia AM; Grindley ND; Joyce CM
Biochemistry; 2007 Sep; 46(38):10790-803. PubMed ID: 17725324
[TBL] [Abstract][Full Text] [Related]
30. Fluorescence resonance energy transfer studies of DNA polymerase β: the critical role of fingers domain movements and a novel non-covalent step during nucleotide selection.
Towle-Weicksel JB; Dalal S; Sohl CD; Doublié S; Anderson KS; Sweasy JB
J Biol Chem; 2014 Jun; 289(23):16541-50. PubMed ID: 24764311
[TBL] [Abstract][Full Text] [Related]
31. Defective Nucleotide Release by DNA Polymerase β Mutator Variant E288K Is the Basis of Its Low Fidelity.
Mahmoud MM; Schechter A; Alnajjar KS; Huang J; Towle-Weicksel J; Eckenroth BE; Doublié S; Sweasy JB
Biochemistry; 2017 Oct; 56(41):5550-5559. PubMed ID: 28945359
[TBL] [Abstract][Full Text] [Related]
32. Increased dNTP binding affinity reveals a nonprocessive role for Escherichia coli beta clamp with DNA polymerase IV.
Bertram JG; Bloom LB; O'Donnell M; Goodman MF
J Biol Chem; 2004 Aug; 279(32):33047-50. PubMed ID: 15210708
[TBL] [Abstract][Full Text] [Related]
33. Kinetic effect of a downstream strand and its 5'-terminal moieties on single nucleotide gap-filling synthesis catalyzed by human DNA polymerase lambda.
Duym WW; Fiala KA; Bhatt N; Suo Z
J Biol Chem; 2006 Nov; 281(47):35649-55. PubMed ID: 17005572
[TBL] [Abstract][Full Text] [Related]
34. Using single-molecule FRET to probe the nucleotide-dependent conformational landscape of polymerase β-DNA complexes.
Fijen C; Mahmoud MM; Kronenberg M; Kaup R; Fontana M; Towle-Weicksel JB; Sweasy JB; Hohlbein J
J Biol Chem; 2020 Jul; 295(27):9012-9020. PubMed ID: 32385112
[TBL] [Abstract][Full Text] [Related]
35. Steady-state and pre-steady-state kinetic analysis of dNTP insertion opposite 8-oxo-7,8-dihydroguanine by Escherichia coli polymerases I exo- and II exo-.
Lowe LG; Guengerich FP
Biochemistry; 1996 Jul; 35(30):9840-9. PubMed ID: 8703958
[TBL] [Abstract][Full Text] [Related]
36. The fidelity of DNA polymerase beta during distributive and processive DNA synthesis.
Osheroff WP; Jung HK; Beard WA; Wilson SH; Kunkel TA
J Biol Chem; 1999 Feb; 274(6):3642-50. PubMed ID: 9920913
[TBL] [Abstract][Full Text] [Related]
37. Hinge residue I174 is critical for proper dNTP selection by DNA polymerase beta.
Yamtich J; Starcevic D; Lauper J; Smith E; Shi I; Rangarajan S; Jaeger J; Sweasy JB
Biochemistry; 2010 Mar; 49(11):2326-34. PubMed ID: 20108981
[TBL] [Abstract][Full Text] [Related]
38. How a low-fidelity DNA polymerase chooses non-Watson-Crick from Watson-Crick incorporation.
Wu WJ; Su MI; Wu JL; Kumar S; Lim LH; Wang CW; Nelissen FH; Chen MC; Doreleijers JF; Wijmenga SS; Tsai MD
J Am Chem Soc; 2014 Apr; 136(13):4927-37. PubMed ID: 24617852
[TBL] [Abstract][Full Text] [Related]
39. Identification of critical residues for the tight binding of both correct and incorrect nucleotides to human DNA polymerase λ.
Brown JA; Pack LR; Sherrer SM; Kshetry AK; Newmister SA; Fowler JD; Taylor JS; Suo Z
J Mol Biol; 2010 Nov; 403(4):505-15. PubMed ID: 20851705
[TBL] [Abstract][Full Text] [Related]
40. A Change in the Rate-Determining Step of Polymerization by the K289M DNA Polymerase β Cancer-Associated Variant.
Alnajjar KS; Garcia-Barboza B; Negahbani A; Nakhjiri M; Kashemirov B; McKenna C; Goodman MF; Sweasy JB
Biochemistry; 2017 Apr; 56(15):2096-2105. PubMed ID: 28326765
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]