BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 9514731)

  • 1. A symmetric-iterated multiple alignment of protein sequences.
    Brocchieri L; Karlin S
    J Mol Biol; 1998 Feb; 276(1):249-64. PubMed ID: 9514731
    [TBL] [Abstract][Full Text] [Related]  

  • 2. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS; Honig B
    J Mol Biol; 2000 Aug; 301(3):691-711. PubMed ID: 10966778
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ARCS: an aggregated related column scoring scheme for aligned sequences.
    Song B; Choi JH; Chen G; Szymanski J; Zhang GQ; Tung AK; Kang J; Kim S; Yang J
    Bioinformatics; 2006 Oct; 22(19):2326-32. PubMed ID: 16870930
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PROMALS: towards accurate multiple sequence alignments of distantly related proteins.
    Pei J; Grishin NV
    Bioinformatics; 2007 Apr; 23(7):802-8. PubMed ID: 17267437
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Comparison of bacteriophage T4 UvsX and human Rad51 filaments suggests that RecA-like polymers may have evolved independently.
    Yang S; VanLoock MS; Yu X; Egelman EH
    J Mol Biol; 2001 Oct; 312(5):999-1009. PubMed ID: 11580245
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Incremental window-based protein sequence alignment algorithms.
    Rangwala H; Karypis G
    Bioinformatics; 2007 Jan; 23(2):e17-23. PubMed ID: 17237087
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R
    BMC Bioinformatics; 2006 Mar; 7():143. PubMed ID: 16542424
    [TBL] [Abstract][Full Text] [Related]  

  • 8. LEON: multiple aLignment Evaluation Of Neighbours.
    Thompson JD; Prigent V; Poch O
    Nucleic Acids Res; 2004; 32(4):1298-307. PubMed ID: 14982955
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Murlet: a practical multiple alignment tool for structural RNA sequences.
    Kiryu H; Tabei Y; Kin T; Asai K
    Bioinformatics; 2007 Jul; 23(13):1588-98. PubMed ID: 17459961
    [TBL] [Abstract][Full Text] [Related]  

  • 10. QOMA: quasi-optimal multiple alignment of protein sequences.
    Zhang X; Kahveci T
    Bioinformatics; 2007 Jan; 23(2):162-8. PubMed ID: 17121778
    [TBL] [Abstract][Full Text] [Related]  

  • 11. T-Coffee: A novel method for fast and accurate multiple sequence alignment.
    Notredame C; Higgins DG; Heringa J
    J Mol Biol; 2000 Sep; 302(1):205-17. PubMed ID: 10964570
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A local multiple alignment method for detection of non-coding RNA sequences.
    Tabei Y; Asai K
    Bioinformatics; 2009 Jun; 25(12):1498-505. PubMed ID: 19376823
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sequence comparisons of intermediate filament chains: evidence of a unique functional/structural role for coiled-coil segment 1A and linker L1.
    Smith TA; Strelkov SV; Burkhard P; Aebi U; Parry DA
    J Struct Biol; 2002; 137(1-2):128-45. PubMed ID: 12064940
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Variable gap penalty for protein sequence-structure alignment.
    Madhusudhan MS; Marti-Renom MA; Sanchez R; Sali A
    Protein Eng Des Sel; 2006 Mar; 19(3):129-33. PubMed ID: 16423846
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The influence of gapped positions in multiple sequence alignments on secondary structure prediction methods.
    Simossis VA; Heringa J
    Comput Biol Chem; 2004 Dec; 28(5-6):351-66. PubMed ID: 15556476
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Blast sampling for structural and functional analyses.
    Friedrich A; Ripp R; Garnier N; Bettler E; Deléage G; Poch O; Moulinier L
    BMC Bioinformatics; 2007 Feb; 8():62. PubMed ID: 17319945
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Finding flexible patterns in unaligned protein sequences.
    Jonassen I; Collins JF; Higgins DG
    Protein Sci; 1995 Aug; 4(8):1587-95. PubMed ID: 8520485
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.
    Pei J; Cai W; Kinch LN; Grishin NV
    Bioinformatics; 2006 Jan; 22(2):164-71. PubMed ID: 16278237
    [TBL] [Abstract][Full Text] [Related]  

  • 19. STRUCTFAST: protein sequence remote homology detection and alignment using novel dynamic programming and profile-profile scoring.
    Debe DA; Danzer JF; Goddard WA; Poleksic A
    Proteins; 2006 Sep; 64(4):960-7. PubMed ID: 16786595
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Improvement of alignment accuracy utilizing sequentially conserved motifs.
    Chakrabarti S; Bhardwaj N; Anand PA; Sowdhamini R
    BMC Bioinformatics; 2004 Oct; 5():167. PubMed ID: 15509307
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.