197 related articles for article (PubMed ID: 9520502)
1. Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm.
Rigoutsos I; Floratos A
Bioinformatics; 1998; 14(1):55-67. PubMed ID: 9520502
[TBL] [Abstract][Full Text] [Related]
2. An efficient, versatile and scalable pattern growth approach to mine frequent patterns in unaligned protein sequences.
Ye K; Kosters WA; Ijzerman AP
Bioinformatics; 2007 Mar; 23(6):687-93. PubMed ID: 17237070
[TBL] [Abstract][Full Text] [Related]
3. Efficient constrained multiple sequence alignment with performance guarantee.
Chin FY; Ho NL; Lam TW; Wong PW; Chan MY
Proc IEEE Comput Soc Bioinform Conf; 2003; 2():337-46. PubMed ID: 16452809
[TBL] [Abstract][Full Text] [Related]
4. MUSA: a parameter free algorithm for the identification of biologically significant motifs.
Mendes ND; Casimiro AC; Santos PM; Sá-Correia I; Oliveira AL; Freitas AT
Bioinformatics; 2006 Dec; 22(24):2996-3002. PubMed ID: 17068086
[TBL] [Abstract][Full Text] [Related]
5. A generic motif discovery algorithm for sequential data.
Jensen KL; Styczynski MP; Rigoutsos I; Stephanopoulos GN
Bioinformatics; 2006 Jan; 22(1):21-8. PubMed ID: 16257985
[TBL] [Abstract][Full Text] [Related]
6. A fast Boyer-Moore type pattern matching algorithm for highly similar sequences.
Ben Nsira N; Lecroq T; Elloumi M
Int J Data Min Bioinform; 2015; 13(3):266-88. PubMed ID: 26547980
[TBL] [Abstract][Full Text] [Related]
7. AntiClustal: Multiple Sequence Alignment by antipole clustering and linear approximate 1-median computation.
Di Pietro C; Di Pietro V; Emmanuele G; Ferro A; Maugeri T; Modica E; Pigola G; Pulvirenti A; Purrello M; Ragusa M; Scalia M; Shasha D; Travali S; Zimmitti V
Proc IEEE Comput Soc Bioinform Conf; 2003; 2():326-36. PubMed ID: 16452808
[TBL] [Abstract][Full Text] [Related]
8. Bases of motifs for generating repeated patterns with wild cards.
Pisanti N; Crochemore M; Grossi R; Sagot MF
IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(1):40-50. PubMed ID: 17044163
[TBL] [Abstract][Full Text] [Related]
9. Finding flexible patterns in unaligned protein sequences.
Jonassen I; Collins JF; Higgins DG
Protein Sci; 1995 Aug; 4(8):1587-95. PubMed ID: 8520485
[TBL] [Abstract][Full Text] [Related]
10. Mining Contiguous Sequential Generators in Biological Sequences.
Zhang J; Wang Y; Zhang C; Shi Y
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(5):855-867. PubMed ID: 26529774
[TBL] [Abstract][Full Text] [Related]
11. Detecting periodic patterns in biological sequences.
Coward E; Drabløs F
Bioinformatics; 1998; 14(6):498-507. PubMed ID: 9694988
[TBL] [Abstract][Full Text] [Related]
12. Designing patterns for profile HMM search.
Sun Y; Buhler J
Bioinformatics; 2007 Jan; 23(2):e36-43. PubMed ID: 17237102
[TBL] [Abstract][Full Text] [Related]
13. Genes@Work: an efficient algorithm for pattern discovery and multivariate feature selection in gene expression data.
Lepre J; Rice JJ; Tu Y; Stolovitzky G
Bioinformatics; 2004 May; 20(7):1033-44. PubMed ID: 14764572
[TBL] [Abstract][Full Text] [Related]
14. Tsukuba BB: a branch and bound algorithm for local multiple alignment of DNA and protein sequences.
Horton P
J Comput Biol; 2001; 8(3):283-303. PubMed ID: 11535177
[TBL] [Abstract][Full Text] [Related]
15. MpBsmi: A new algorithm for the recognition of continuous biological sequence pattern based on index structure.
Li W; Ren J
PLoS One; 2018; 13(4):e0195601. PubMed ID: 29684052
[TBL] [Abstract][Full Text] [Related]
16. EMD: an ensemble algorithm for discovering regulatory motifs in DNA sequences.
Hu J; Yang YD; Kihara D
BMC Bioinformatics; 2006 Jul; 7():342. PubMed ID: 16839417
[TBL] [Abstract][Full Text] [Related]
17. Efficient discovery of conserved patterns using a pattern graph.
Jonassen I
Comput Appl Biosci; 1997 Oct; 13(5):509-22. PubMed ID: 9367124
[TBL] [Abstract][Full Text] [Related]
18. Improved multiple sequence alignments using coupled pattern mining.
Hossain KS; Patnaik D; Laxman S; Jain P; Bailey-Kellogg C; Ramakrishnan N
IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(5):1098-112. PubMed ID: 24384701
[TBL] [Abstract][Full Text] [Related]
19. The 3of5 web application for complex and comprehensive pattern matching in protein sequences.
Seiler M; Mehrle A; Poustka A; Wiemann S
BMC Bioinformatics; 2006 Mar; 7():144. PubMed ID: 16542452
[TBL] [Abstract][Full Text] [Related]
20. A profile-based deterministic sequential Monte Carlo algorithm for motif discovery.
Liang KC; Wang X; Anastassiou D
Bioinformatics; 2008 Jan; 24(1):46-55. PubMed ID: 18024972
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
