BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

106 related articles for article (PubMed ID: 9591097)

  • 1. [Estimation of quality of approximation of atom-atom contacts of amino acid residues in proteins by the contacts of the residue force centers].
    Lobanov MIu; Rykunov DS; Finkel'shteĭn AV
    Biofizika; 1998; 43(2):215-22. PubMed ID: 9591097
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Contact pair dynamics during folding of two small proteins: chicken villin head piece and the Alzheimer protein beta-amyloid.
    Mukherjee A; Bagchi B
    J Chem Phys; 2004 Jan; 120(3):1602-12. PubMed ID: 15268287
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F
    J Mol Biol; 2000 Jul; 300(5):1335-59. PubMed ID: 10903873
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The occurrence of C--H...O hydrogen bonds in alpha-helices and helix termini in globular proteins.
    Manikandan K; Ramakumar S
    Proteins; 2004 Sep; 56(4):768-81. PubMed ID: 15281129
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Protein contacts, inter-residue interactions and side-chain modelling.
    Faure G; Bornot A; de Brevern AG
    Biochimie; 2008 Apr; 90(4):626-39. PubMed ID: 18086572
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Interresidue contacts in proteins and protein-protein interfaces and their use in characterizing the homodimeric interface.
    Saha RP; Bahadur RP; Chakrabarti P
    J Proteome Res; 2005; 4(5):1600-9. PubMed ID: 16212412
    [TBL] [Abstract][Full Text] [Related]  

  • 7. [Study of the spatial structure of globular proteins by tritium planigraphy. Short peptides as a model of a fully extended polypeptide chain].
    Gedrovich AV; Badun GA
    Mol Biol (Mosk); 1992; 26(3):558-64. PubMed ID: 1406611
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Multiple contact network is a key determinant to protein folding rates.
    Gromiha MM
    J Chem Inf Model; 2009 Apr; 49(4):1130-5. PubMed ID: 19338373
    [TBL] [Abstract][Full Text] [Related]  

  • 9. [Search for structural factors responsible for the stability of proteins from thermophilic organisms].
    Gliakina AV; Lobanov AV; Galzitskaia OV
    Mol Biol (Mosk); 2007; 41(4):681-7. PubMed ID: 17936989
    [TBL] [Abstract][Full Text] [Related]  

  • 10. [Analysis of the spatial structure of proteins in terms of residue-residue contacts. II. Contact affinity].
    Rodionov MA; Gurevich AV; Galaktionov SG
    Mol Biol (Mosk); 1993; 27(2):363-70. PubMed ID: 8487768
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Terminal residues in protein chains: residue preference, conformation, and interaction.
    Pal D; Chakrabarti P
    Biopolymers; 2000 May; 53(6):467-75. PubMed ID: 10775062
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Gaussian neighborhood: a new measure of accessibility for residues of protein molecules.
    Nauchitel VV; Somorjai RL
    Proteins; 1993 Jan; 15(1):50-61. PubMed ID: 8383849
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Modulation of intrinsic phi,psi propensities of amino acids by neighbouring residues in the coil regions of protein structures: NMR analysis and dissection of a beta-hairpin peptide.
    Griffiths-Jones SR; Sharman GJ; Maynard AJ; Searle MS
    J Mol Biol; 1998 Dec; 284(5):1597-609. PubMed ID: 9878373
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identifying folding nucleus based on residue contact networks of proteins.
    Li J; Wang J; Wang W
    Proteins; 2008 Jun; 71(4):1899-907. PubMed ID: 18175318
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Importance of hydrophobic cluster formation through long-range contacts in the folding transition state of two-state proteins.
    Selvaraj S; Gromiha MM
    Proteins; 2004 Jun; 55(4):1023-35. PubMed ID: 15146499
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Statistically based reduced representation of amino acid side chains.
    Rainey JK; Goh MC
    J Chem Inf Comput Sci; 2004; 44(3):817-30. PubMed ID: 15154746
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Defining and characterizing protein surface using alpha shapes.
    Albou LP; Schwarz B; Poch O; Wurtz JM; Moras D
    Proteins; 2009 Jul; 76(1):1-12. PubMed ID: 19089982
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The SAAP force field. A simple approach to a new all-atom protein force field by using single amino acid potential (SAAP) functions in various solvents.
    Iwaoka M; Tomoda S
    J Comput Chem; 2003 Jul; 24(10):1192-200. PubMed ID: 12820126
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Amino acid pairing preferences in parallel beta-sheets in proteins.
    Fooks HM; Martin AC; Woolfson DN; Sessions RB; Hutchinson EG
    J Mol Biol; 2006 Feb; 356(1):32-44. PubMed ID: 16337654
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantifying the effect of burial of amino acid residues on protein stability.
    Zhou H; Zhou Y
    Proteins; 2004 Feb; 54(2):315-22. PubMed ID: 14696193
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.