These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

181 related articles for article (PubMed ID: 9593186)

  • 21. Model-free methods of analyzing domain motions in proteins from simulation: a comparison of normal mode analysis and molecular dynamics simulation of lysozyme.
    Hayward S; Kitao A; Berendsen HJ
    Proteins; 1997 Mar; 27(3):425-37. PubMed ID: 9094744
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Detecting coupled collective motions in protein by independent subspace analysis.
    Sakuraba S; Joti Y; Kitao A
    J Chem Phys; 2010 Nov; 133(18):185102. PubMed ID: 21073231
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Conformation of T4 lysozyme in solution. Hinge-bending motion and the substrate-induced conformational transition studied by site-directed spin labeling.
    Mchaourab HS; Oh KJ; Fang CJ; Hubbell WL
    Biochemistry; 1997 Jan; 36(2):307-16. PubMed ID: 9003182
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Coarse-graining protein structures with local multivariate features from molecular dynamics.
    Zhang Z; Wriggers W
    J Phys Chem B; 2008 Nov; 112(44):14026-35. PubMed ID: 18855436
    [TBL] [Abstract][Full Text] [Related]  

  • 25. The tail lysozyme complex of bacteriophage T4.
    Arisaka F; Kanamaru S; Leiman P; Rossmann MG
    Int J Biochem Cell Biol; 2003 Jan; 35(1):16-21. PubMed ID: 12467643
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Observing lysozyme's closing and opening motions by high-resolution single-molecule enzymology.
    Akhterov MV; Choi Y; Olsen TJ; Sims PC; Iftikhar M; Gul OT; Corso BL; Weiss GA; Collins PG
    ACS Chem Biol; 2015 Jun; 10(6):1495-501. PubMed ID: 25763461
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Multiple alanine replacements within alpha-helix 126-134 of T4 lysozyme have independent, additive effects on both structure and stability.
    Zhang XJ; Baase WA; Matthews BW
    Protein Sci; 1992 Jun; 1(6):761-76. PubMed ID: 1304917
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Fluctuation Flooding Method (FFM) for accelerating conformational transitions of proteins.
    Harada R; Takano Y; Shigeta Y
    J Chem Phys; 2014 Mar; 140(12):125103. PubMed ID: 24697482
    [TBL] [Abstract][Full Text] [Related]  

  • 29. E. coli 5'-nucleotidase undergoes a hinge-bending domain rotation resembling a ball-and-socket motion.
    Knöfel T; Sträter N
    J Mol Biol; 2001 May; 309(1):255-66. PubMed ID: 11491294
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Force field impact and spin-probe modeling in molecular dynamics simulations of spin-labeled T4 lysozyme.
    Stoica I
    J Mol Model; 2005 Jun; 11(3):210-25. PubMed ID: 15806387
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Exploring subdomain cooperativity in T4 lysozyme I: structural and energetic studies of a circular permutant and protein fragment.
    Cellitti J; Llinas M; Echols N; Shank EA; Gillespie B; Kwon E; Crowder SM; Dahlquist FW; Alber T; Marqusee S
    Protein Sci; 2007 May; 16(5):842-51. PubMed ID: 17400926
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Structure-based analysis of protein dynamics: comparison of theoretical results for hen lysozyme with X-ray diffraction and NMR relaxation data.
    Haliloglu T; Bahar I
    Proteins; 1999 Dec; 37(4):654-67. PubMed ID: 10651280
    [TBL] [Abstract][Full Text] [Related]  

  • 33. N-terminal T4 lysozyme fusion facilitates crystallization of a G protein coupled receptor.
    Zou Y; Weis WI; Kobilka BK
    PLoS One; 2012; 7(10):e46039. PubMed ID: 23056231
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Enhanced Sampling of Protein Conformational Transitions via Dynamically Optimized Collective Variables.
    Brotzakis ZF; Parrinello M
    J Chem Theory Comput; 2019 Feb; 15(2):1393-1398. PubMed ID: 30557019
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Identification and Validation of Reaction Coordinates Describing Protein Functional Motion: Hierarchical Dynamics of T4 Lysozyme.
    Ernst M; Wolf S; Stock G
    J Chem Theory Comput; 2017 Oct; 13(10):5076-5088. PubMed ID: 28915045
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Structural determinants of nitroxide motion in spin-labeled proteins: tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme.
    Guo Z; Cascio D; Hideg K; Kálái T; Hubbell WL
    Protein Sci; 2007 Jun; 16(6):1069-86. PubMed ID: 17473014
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Transform and relax sampling for highly anisotropic systems: application to protein domain motion and folding.
    Kitao A
    J Chem Phys; 2011 Jul; 135(4):045101. PubMed ID: 21806159
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Modeling protein-small molecule interactions: structure and thermodynamics of noble gases binding in a cavity in mutant phage T4 lysozyme L99A.
    Mann G; Hermans J
    J Mol Biol; 2000 Sep; 302(4):979-89. PubMed ID: 10993736
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Molecular dynamics study of an insertion/duplication mutant of bacteriophage T4 lysozyme reveals the nature of α→β transition in full protein context.
    Kaur H; Sasidhar YU
    Phys Chem Chem Phys; 2013 May; 15(20):7819-30. PubMed ID: 23598905
    [TBL] [Abstract][Full Text] [Related]  

  • 40. X-ray structural and simulation analysis of a protein mutant: the value of a combined approach.
    Mattos C; Cohen JD; Green DF; Tidor B; Karplus M
    Proteins; 2004 May; 55(3):733-42. PubMed ID: 15103635
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.