These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

102 related articles for article (PubMed ID: 9628726)

  • 1. Theoretical and experimental analysis of ionization equilibria in ovomucoid third domain.
    Forsyth WR; Gilson MK; Antosiewicz J; Jaren OR; Robertson AD
    Biochemistry; 1998 Jun; 37(24):8643-52. PubMed ID: 9628726
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Two conformational states of Turkey ovomucoid third domain at low pH: three-dimensional structures, internal dynamics, and interconversion kinetics and thermodynamics.
    Song J; Laskowski M; Qasim MA; Markley JL
    Biochemistry; 2003 Jun; 42(21):6380-91. PubMed ID: 12767219
    [TBL] [Abstract][Full Text] [Related]  

  • 3. pH, ionic strength, and temperature dependences of ionization equilibria for the carboxyl groups in turkey ovomucoid third domain.
    Schaller W; Robertson AD
    Biochemistry; 1995 Apr; 34(14):4714-23. PubMed ID: 7718577
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Linear-scaling molecular orbital calculations for the pKa values of ionizable residues in proteins.
    Ohno K; Sakurai M
    J Comput Chem; 2006 May; 27(7):906-16. PubMed ID: 16550537
    [TBL] [Abstract][Full Text] [Related]  

  • 5. NMR determination of pKa values for Asp, Glu, His, and Lys mutants at each variable contiguous enzyme-inhibitor contact position of the turkey ovomucoid third domain.
    Song J; Laskowski M; Qasim MA; Markley JL
    Biochemistry; 2003 Mar; 42(10):2847-56. PubMed ID: 12627950
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Assignment of the 13C-NMR spectra of virgin and reactive-site modified turkey ovomucoid third domain.
    Robertson AD; Rhyu GI; Westler WM; Markley JL
    Biopolymers; 1990 Feb; 29(2):461-7. PubMed ID: 2331509
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The determinants of carboxyl pKa values in turkey ovomucoid third domain.
    Li H; Robertson AD; Jensen JH
    Proteins; 2004 May; 55(3):689-704. PubMed ID: 15103631
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Solution structure of reactive-site hydrolyzed turkey ovomucoid third domain by nuclear magnetic resonance and distance geometry methods.
    Walkenhorst WF; Krezel AM; Rhyu GI; Markley JL
    J Mol Biol; 1994 Sep; 242(3):215-30. PubMed ID: 8089843
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Thermodynamic criterion for the conformation of P1 residues of substrates and of inhibitors in complexes with serine proteinases.
    Qasim MA; Lu SM; Ding J; Bateman KS; James MN; Anderson S; Song J; Markley JL; Ganz PJ; Saunders CW; Laskowski M
    Biochemistry; 1999 Jun; 38(22):7142-50. PubMed ID: 10353824
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Electrostatic contributions to the stability of halophilic proteins.
    Elcock AH; McCammon JA
    J Mol Biol; 1998 Jul; 280(4):731-48. PubMed ID: 9677300
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Dissecting the energetics of a protein-protein interaction: the binding of ovomucoid third domain to elastase.
    Baker BM; Murphy KP
    J Mol Biol; 1997 May; 268(2):557-69. PubMed ID: 9159490
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Insensitivity of perturbed carboxyl pK(a) values in the ovomucoid third domain to charge replacement at a neighboring residue.
    Forsyth WR; Robertson AD
    Biochemistry; 2000 Jul; 39(27):8067-72. PubMed ID: 10891089
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structural insights into the non-additivity effects in the sequence-to-reactivity algorithm for serine peptidases and their inhibitors.
    Lee TW; Qasim MA; Laskowski M; James MN
    J Mol Biol; 2007 Mar; 367(2):527-46. PubMed ID: 17266986
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Perturbed pKA-values in the denatured states of proteins.
    Tan YJ; Oliveberg M; Davis B; Fersht AR
    J Mol Biol; 1995 Dec; 254(5):980-92. PubMed ID: 7500365
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Contribution of peptide bonds to inhibitor-protease binding: crystal structures of the turkey ovomucoid third domain backbone variants OMTKY3-Pro18I and OMTKY3-psi[COO]-Leu18I in complex with Streptomyces griseus proteinase B (SGPB) and the structure of the free inhibitor, OMTKY-3-psi[CH2NH2+]-Asp19I.
    Bateman KS; Huang K; Anderson S; Lu W; Qasim MA; Laskowski M; James MN
    J Mol Biol; 2001 Jan; 305(4):839-49. PubMed ID: 11162096
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Reproducing basic pKa values for turkey ovomucoid third domain using a polarizable force field.
    Click TH; Kaminski GA
    J Phys Chem B; 2009 Jun; 113(22):7844-50. PubMed ID: 19432439
    [TBL] [Abstract][Full Text] [Related]  

  • 17. pH dependence of stability of the 10th human fibronectin type III domain: a computational study.
    Mallik B; Zhang L; Koide S; Morikis D
    Biotechnol Prog; 2008; 24(1):48-55. PubMed ID: 17935345
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Electrostatic polarization is crucial for reproducing pKa shifts of carboxylic residues in Turkey ovomucoid third domain.
    Macdermaid CM; Kaminski GA
    J Phys Chem B; 2007 Aug; 111(30):9036-44. PubMed ID: 17602581
    [TBL] [Abstract][Full Text] [Related]  

  • 19. pKa values and the pH dependent stability of the N-terminal domain of L9 as probes of electrostatic interactions in the denatured state. Differentiation between local and nonlocal interactions.
    Kuhlman B; Luisi DL; Young P; Raleigh DP
    Biochemistry; 1999 Apr; 38(15):4896-903. PubMed ID: 10200179
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Molecular mechanisms of pH-driven conformational transitions of proteins: insights from continuum electrostatics calculations of acid unfolding.
    Fitch CA; Whitten ST; Hilser VJ; García-Moreno E B
    Proteins; 2006 Apr; 63(1):113-26. PubMed ID: 16400648
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.