BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

205 related articles for article (PubMed ID: 9747586)

  • 1. Probing the binding region of the single-stranded DNA-binding domain of rat DNA polymerase beta using nanosecond-pulse laser-induced cross-linking and mass spectrometry.
    Connor DA; Falick AM; Young MC; Shetlar MD
    Photochem Photobiol; 1998 Sep; 68(3):299-308. PubMed ID: 9747586
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of the template-binding cleft of T7 RNA polymerase as the site for promoter binding by photochemical cross-linking with psoralen.
    Sastry SS
    Biochemistry; 1996 Oct; 35(42):13519-30. PubMed ID: 8885831
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Oxidatively induced DNA-protein cross-linking between single-stranded binding protein and oligodeoxynucleotides containing 8-oxo-7,8-dihydro-2'-deoxyguanosine.
    Johansen ME; Muller JG; Xu X; Burrows CJ
    Biochemistry; 2005 Apr; 44(15):5660-71. PubMed ID: 15823024
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transition between different binding modes in rat DNA polymerase beta-ssDNA complexes.
    Jezewska MJ; Rajendran S; Bujalowski W
    J Mol Biol; 1998 Dec; 284(4):1113-31. PubMed ID: 9837730
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Mass spectrometry of UV-cross-linked protein-nucleic acid complexes: identification of amino acid residues in the single-stranded DNA-binding domain of human replication protein A.
    Doneanu CE; Gafken PR; Bennett SE; Barofsky DF
    Anal Chem; 2004 Oct; 76(19):5667-76. PubMed ID: 15456284
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Probing alpha-crystallin structure using chemical cross-linkers and mass spectrometry.
    Peterson JJ; Young MM; Takemoto LJ
    Mol Vis; 2004 Nov; 10():857-66. PubMed ID: 15570221
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Differential proximity probing of two DNA binding sites in the Escherichia coli recA protein using photo-cross-linking methods.
    Wang Y; Adzuma K
    Biochemistry; 1996 Mar; 35(11):3563-71. PubMed ID: 8639507
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Kinetic mechanisms of rat polymerase beta-ssDNA interactions. Quantitative fluorescence stopped-flow analysis of the formation of the (Pol beta)(16) and (Pol beta)(5) ssDNA binding mode.
    Jezewska MJ; Rajendran S; Galletto R; Bujalowski W
    J Mol Biol; 2001 Nov; 313(5):977-1002. PubMed ID: 11700054
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Backbone dynamics and refined solution structure of the N-terminal domain of DNA polymerase beta. Correlation with DNA binding and dRP lyase activity.
    Maciejewski MW; Liu D; Prasad R; Wilson SH; Mullen GP
    J Mol Biol; 2000 Feb; 296(1):229-53. PubMed ID: 10656829
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MALDI-MS detection of noncovalent interactions of single stranded DNA with Escherichia coli single-stranded DNA-binding protein.
    Chen F; Mädler S; Weidmann S; Zenobi R
    J Mass Spectrom; 2012 May; 47(5):560-6. PubMed ID: 22549990
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Recognition of template-primer and gapped DNA substrates by the human DNA polymerase beta.
    Rajendran S; Jezewska MJ; Bujalowski W
    J Mol Biol; 2001 May; 308(3):477-500. PubMed ID: 11327782
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identification of base-specific contacts in protein-DNA complexes by photocrosslinking and mass spectrometry: a case study using the restriction endonuclease SsoII.
    Pingoud V; Geyer H; Geyer R; Kubareva E; Bujnicki JM; Pingoud A
    Mol Biosyst; 2005 Jul; 1(2):135-41. PubMed ID: 16880975
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Analysis of protein-nucleic acid interactions by photochemical cross-linking and mass spectrometry.
    Steen H; Jensen ON
    Mass Spectrom Rev; 2002; 21(3):163-82. PubMed ID: 12476441
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Electrospray ionization-mass spectrometry study of the interaction of cisplatin-adducted oligonucleotides with human XPA minimal binding domain protein.
    Xu N; Pasa-Tolić L; Smith RD; Ni S; Thrall BD
    Anal Biochem; 1999 Jul; 272(1):26-33. PubMed ID: 10405289
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mapping cross-linking sites in modified proteins with mass spectrometry: an application to cross-linked hemoglobins.
    Yang T; Horejsh DR; Mahan KJ; Zaluzec EJ; Watson TJ; Gage DA
    Anal Biochem; 1996 Nov; 242(1):55-63. PubMed ID: 8923964
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Molecular basis of guanine nucleotide dissociation inhibitor activity of human neuroglobin by chemical cross-linking and mass spectrometry.
    Kitatsuji C; Kurogochi M; Nishimura S; Ishimori K; Wakasugi K
    J Mol Biol; 2007 Apr; 368(1):150-60. PubMed ID: 17337004
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Interaction of oligonucleotides with a single stranded DNA binding site of RecA protein.
    Nakano S; Sasaki M; Sugimoto N
    Nucleic Acids Symp Ser; 1995; (34):61-2. PubMed ID: 8841552
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Chemical cross-linking with thiol-cleavable reagents combined with differential mass spectrometric peptide mapping--a novel approach to assess intermolecular protein contacts.
    Bennett KL; Kussmann M; Björk P; Godzwon M; Mikkelsen M; Sørensen P; Roepstorff P
    Protein Sci; 2000 Aug; 9(8):1503-18. PubMed ID: 10975572
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Identification of linker regions and domain borders of the transcription activator protein NtrC from Escherichia coli by limited proteolysis, in-gel digestion, and mass spectrometry.
    Bantscheff M; Weiss V; Glocker MO
    Biochemistry; 1999 Aug; 38(34):11012-20. PubMed ID: 10460156
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Peptidic determinants and structural model of human NDP kinase B (Nm23-H2) bound to single-stranded DNA.
    Raveh S; Vinh J; Rossier J; Agou F; Véron M
    Biochemistry; 2001 May; 40(20):5882-93. PubMed ID: 11352723
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.