BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

98 related articles for article (PubMed ID: 9783226)

  • 1. Automated clustering and assembly of large EST collections.
    Yee DP; Conklin D
    Proc Int Conf Intell Syst Mol Biol; 1998; 6():203-11. PubMed ID: 9783226
    [TBL] [Abstract][Full Text] [Related]  

  • 2. [Analysis, identification and correction of some errors of model refseqs appeared in NCBI Human Gene Database by in silico cloning and experimental verification of novel human genes].
    Zhang DL; Ji L; Li YD
    Yi Chuan Xue Bao; 2004 May; 31(5):431-43. PubMed ID: 15478601
    [TBL] [Abstract][Full Text] [Related]  

  • 3. [A new method for EST clustering].
    Zhang LD; Yuan DJ; Zhang JW; Wang SP; Zhang QF
    Yi Chuan Xue Bao; 2003 Feb; 30(2):147-53. PubMed ID: 12776603
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Penaeus monodon gene discovery project: the generation of an EST collection and establishment of a database.
    Tassanakajon A; Klinbunga S; Paunglarp N; Rimphanitchayakit V; Udomkit A; Jitrapakdee S; Sritunyalucksana K; Phongdara A; Pongsomboon S; Supungul P; Tang S; Kuphanumart K; Pichyangkura R; Lursinsap C
    Gene; 2006 Dec; 384():104-12. PubMed ID: 16945489
    [TBL] [Abstract][Full Text] [Related]  

  • 5. EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome.
    Jain M; Shrager J; Harris EH; Halbrook R; Grossman AR; Hauser C; Vallon O
    Nucleic Acids Res; 2007; 35(6):2074-83. PubMed ID: 17355987
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.
    Carre W; Wang X; Porter TE; Nys Y; Tang J; Bernberg E; Morgan R; Burnside J; Aggrey SE; Simon J; Cogburn LA
    Physiol Genomics; 2006 May; 25(3):514-24. PubMed ID: 16554550
    [TBL] [Abstract][Full Text] [Related]  

  • 7. EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarray expression data integration.
    Forment J; Gilabert F; Robles A; Conejero V; Nuez F; Blanca JM
    BMC Bioinformatics; 2008 Jan; 9():5. PubMed ID: 18179701
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The construction of Arabidopsis expressed sequence tag assemblies. A new resource to facilitate gene identification.
    Rounsley SD; Glodek A; Sutton G; Adams MD; Somerville CR; Venter JC; Kerlavage AR
    Plant Physiol; 1996 Nov; 112(3):1177-83. PubMed ID: 8938416
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ESTIMA, a tool for EST management in a multi-project environment.
    Kumar CG; LeDuc R; Gong G; Roinishivili L; Lewin HA; Liu L
    BMC Bioinformatics; 2004 Nov; 5():176. PubMed ID: 15527510
    [TBL] [Abstract][Full Text] [Related]  

  • 10. JESAM: CORBA software components to create and publish EST alignments and clusters.
    Parsons JD; Rodriguez-Tomé P
    Bioinformatics; 2000 Apr; 16(4):313-25. PubMed ID: 10869029
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Mining SNPs from EST databases.
    Picoult-Newberg L; Ideker TE; Pohl MG; Taylor SL; Donaldson MA; Nickerson DA; Boyce-Jacino M
    Genome Res; 1999 Feb; 9(2):167-74. PubMed ID: 10022981
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A hitchhiker's guide to expressed sequence tag (EST) analysis.
    Nagaraj SH; Gasser RB; Ranganathan S
    Brief Bioinform; 2007 Jan; 8(1):6-21. PubMed ID: 16772268
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Pepper EST database: comprehensive in silico tool for analyzing the chili pepper (Capsicum annuum) transcriptome.
    Kim HJ; Baek KH; Lee SW; Kim J; Lee BW; Cho HS; Kim WT; Choi D; Hur CG
    BMC Plant Biol; 2008 Oct; 8():101. PubMed ID: 18844979
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.
    Uenishi H; Eguchi T; Suzuki K; Sawazaki T; Toki D; Shinkai H; Okumura N; Hamasima N; Awata T
    Nucleic Acids Res; 2004 Jan; 32(Database issue):D484-8. PubMed ID: 14681463
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs).
    Liang C; Wang G; Liu L; Ji G; Fang L; Liu Y; Carter K; Webb JS; Dean JF
    BMC Genomics; 2007 May; 8():134. PubMed ID: 17535431
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mining of assembled expressed sequence tag (EST) data for protein families: application to the G protein-coupled receptor superfamily.
    Conklin D; Yee DP; Millar R; Engelbrecht J; Vissing H
    Brief Bioinform; 2000 Feb; 1(1):93-9. PubMed ID: 11466977
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ESTprep: preprocessing cDNA sequence reads.
    Scheetz TE; Trivedi N; Roberts CA; Kucaba T; Berger B; Robinson NL; Birkett CL; Gavin AJ; O'Leary B; Braun TA; Bonaldo MF; Robinson JP; Sheffield VC; Soares MB; Casavant TL
    Bioinformatics; 2003 Jul; 19(11):1318-24. PubMed ID: 12874042
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Novel retinal genes discovered by mining the mouse embryonic RetinalExpress database.
    Liang S; Zhao S; Mu X; Thomas T; Klein WH
    Mol Vis; 2004 Oct; 10():773-86. PubMed ID: 15496829
    [TBL] [Abstract][Full Text] [Related]  

  • 19. EST clustering error evaluation and correction.
    Wang JP; Lindsay BG; Leebens-Mack J; Cui L; Wall K; Miller WC; dePamphilis CW
    Bioinformatics; 2004 Nov; 20(17):2973-84. PubMed ID: 15189818
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Improving quality of expressed sequence tag (EST) databases: recovery of reversed, antisense cDNA sequences.
    Navarro E; Espinosa L
    Microb Comp Genomics; 2000; 5(1):17-24. PubMed ID: 11011762
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 5.