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  • Title: Interactive visualization software for exploring phylogenetic trees and clades.
    Author: Derthick M.
    Journal: Bioinformatics; 2008 Mar 15; 24(6):868-9. PubMed ID: 18263642.
    Abstract:
    UNLABELLED: The Summary Tree Explorer (STE) is a Java application for interactively exploring sets of phylogenetic trees using two coupled representations: a node-and-link diagram and a textual list of common clades. Selection, pruning, filtering or re-rooting in one representation is immediately reflected in the other. While summary trees are more effective at showing the relationship among clades, they can only show a consistent subset of those that appear in the textual list. Working with both representations mitigates the disadvantages of having to choose just one. AVAILABILITY: STE, along with several sample datasets, is available at http://cityscape.inf.cs.cmu.edu/phylogeny/
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