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  • Title: Introduction to comparing large sequence sets.
    Author: Page RD.
    Journal: Curr Protoc Bioinformatics; 2003 Feb; Chapter 10():Unit 10.1. PubMed ID: 18428691.
    Abstract:
    Comparisons of whole genomes can yield important insights into the evolution of genome structure, such as the role of inversions in bacterial evolution and the identification of large-scale duplications in the human genome. This unit briefly compares two tools for aligning whole genome sequences: MUMmer and PipMaker. These tools differ in both the underlying algorithms used, and in the interface they present to the user.
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