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  • Title: Global analysis of non-coding small RNAs in Arabidopsis in response to jasmonate treatment by deep sequencing technology.
    Author: Zhang B, Xie D, Jin Z.
    Journal: J Integr Plant Biol; 2012 Feb; 54(2):73-86. PubMed ID: 22221297.
    Abstract:
    In plants, non-coding small RNAs play a vital role in plant development and stress responses. To explore the possible role of non-coding small RNAs in the regulation of the jasmonate (JA) pathway, we compared the non-coding small RNAs between the JA-deficient aos mutant and the JA-treated wild type Arabidopsis via high-throughput sequencing. Thirty new miRNAs and 27 new miRNA candidates were identified through bioinformatics approach. Forty-nine known miRNAs (belonging to 24 families), 15 new miRNAs and new miRNA candidates (belonging to 11 families) and 3 tasiRNA families were induced by JA, whereas 1 new miRNA, 1 tasiRNA family and 22 known miRNAs (belonging to 9 families) were repressed by JA.
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