These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


PUBMED FOR HANDHELDS

Search MEDLINE/PubMed


  • Title: Excited-state deactivation pathways in uracil versus hydrated uracil: solvatochromatic shift in the (1)nπ* state is the key.
    Author: Zhang X, Herbert JM.
    Journal: J Phys Chem B; 2014 Jul 17; 118(28):7806-17. PubMed ID: 24428679.
    Abstract:
    Excited-state deactivation mechanisms of uracil are investigated using spin-flip time-dependent density functional theory. Two important minimum-energy crossing points are located, for both gas-phase and hydrated uracil, and optimized relaxation pathways connecting the most important critical points on the (1)nπ* and (1)ππ* potential energy surfaces are determined. An ultrafast decay time constant, measured via femtosecond spectroscopy, is assigned to direct (1)ππ* → S0 deactivation, while a slower decay component is assigned to indirect (1)ππ* → (1)nπ* → S0 deactivation. The shorter lifetime of the dark (1)nπ* state in aqueous solution is attributed to a decrease in the energy barrier along the pathway connecting the (1)nπ* minimum to a (1)ππ*/S0 conical intersection. This barrier arises due to hydrogen bonding between uracil and water, leading to a blue-shift in the S0 → (1)nπ* excitation energy and considerable modification of energy barriers on the (1)nπ* potential surface. These results illustrate how hydrogen bonding to the chromophore can significantly impact excited-state dynamics and also highlight that relaxation pathways can be elucidated using low-cost methods based on density functional theory.
    [Abstract] [Full Text] [Related] [New Search]