These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Search MEDLINE/PubMed

  • Title: Polarizable QM/MM Multiconfiguration Self-Consistent Field Approach with State-Specific Corrections: Environment Effects on Cytosine Absorption Spectrum.
    Author: Li Q, Mennucci B, Robb MA, Blancafort L, Curutchet C.
    Journal: J Chem Theory Comput; 2015 Apr 14; 11(4):1674-82. PubMed ID: 26574377.
    Abstract:
    We present the formulation and implementation of a polarizable quantum mechanics/molecular mechanics (QM/MM) strategy to describe environment effects in multiconfiguration self-consistent field calculations. The strategy is applied to the calculation of the vertical absorption spectrum of cytosine in water. In our approach, mutual polarization of the solute and the solvent is solved self-consistently at the complete-active-space self-consistent-field (CASSCF) level, and the resulting set of charges and dipoles is used to calculate vertical excitation energies using the complete-active-space second-order perturbative (CASPT2) approach and its multistate (MS-CASPT2) variant. In order to treat multiple excited states, we converge the solvent polarization with respect to the state-averaged density of the solute. In order to obtain the final energies, however, we introduce a state-specific correction, where the solvent polarization is recomputed with the density of each state, and demonstrate that this correction brings the excitation energies closer to the values obtained with state-optimized orbitals. Comparison with PCM and nonpolarizable QM/MM calculations shows the importance of specific solute-solvent interactions and environment polarization in describing experiments. Overall, the calculated excitations for the π → π* states in water show good agreement with the experimental spectrum, whereas the n → π* appear at energies above 6 eV, approximately 1 eV higher than in the gas phase. Beyond solvents, the new method will allow studying the impact of heterogeneous biological environments in multiple excited states, as well as the treatment of multichromophoric systems where charge transfer and exciton states play important roles.
    [Abstract] [Full Text] [Related] [New Search]