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  • Title: Structure of a T = 1 aggregate of alfalfa mosaic virus coat protein seen at 4.5 A resolution.
    Author: Fukuyama K, Abdel-Meguid SS, Johnson JE, Rossmann MG.
    Journal: J Mol Biol; 1983 Jul 15; 167(4):873-90. PubMed ID: 6876169.
    Abstract:
    A T = 1 empty aggregate of alfalfa mosaic virus coat protein had been crystallized in a hexagonal unit cell and its orientation was determined with the rotation function. A single heavy-atom derivative has now been prepared and the position of the two Hg atoms per protein subunit were determined using a systematic Patterson search procedure, given the particle orientation. Phases, initially determined by single isomorphous replacement, were refined by six cycles of electron density averaging and solvent leveling to produce a 4.5 A resolution electron density map. The protein coat is confined between 95 and 58 A radius. The subunit boundary could be delineated easily. It has a central cavity reminiscent of the beta-barrel in other spherical plant viruses, but its topology could not be determined unambiguously. The spherical particle has large holes at the 5-fold axes, consistent with previous observations. The subunits have substantial interactions at the 2 and 3-fold axes. The structure of the elongated particles is discussed in relation to these results.
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