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  • Title: PdbMotif--a tool for the automatic identification and display of motifs in protein structures.
    Author: Saqi MA, Sayle R.
    Journal: Comput Appl Biosci; 1994 Sep; 10(5):545-6. PubMed ID: 7828071.
    Abstract:
    A program PdbMotif, which automatically identifies protein motifs in a protein data bank file and generates a script file which can be read directly by the molecular rendering program RasMol, is described. PdbMotif accepts the standard PROSITE pattern syntax and will scan the PROSITE pattern database or a set of user defined patterns. Any motifs detected are automatically highlighted in the RasMol image.
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