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  • Title: A mutated promoter of a human Ig V lambda gene segment is associated with reduced germ-line transcription and a low frequency of rearrangement.
    Author: Stiernholm NB, Berinstein NL.
    Journal: J Immunol; 1995 Feb 15; 154(4):1748-61. PubMed ID: 7836759.
    Abstract:
    Several explanations for skewed variable (V) gene usage in the expressed Ig repertoire have been put forth, ranging from cellular selection to differences in the actual rearrangement frequencies of individual V gene segments. In this report we study V gene usage in human Ig lambda rearrangements in an in vitro system, thus largely avoiding selective forces. We find a significant bias in V lambda gene usage in these rearrangements. Through deletional mapping on Southern blots, the relative chromosomal organization of members of the V lambda I, V lambda V, V lambda VI, and V lambda X families was established, which revealed that the bias in V lambda gene usage cannot be readily explained by chromosomal location. We further found that the qualities of the recombination signal sequences, nucleotide sequence/regions of homology of the coding ends or the CpG methylation patterns, do not explain this bias either. We do, however, find a direct correlation between a low frequency of rearrangement and a reduced level of germ-line transcription of a particular V gene segment. We were able to identify three mutations in the octamer motif of the promoter region of this V gene segment. This is the first report showing that mutations in important transcriptional control motifs of individual V gene segments are associated with reduced levels of transcription in the germ line, which in turn may influence the frequency of rearrangement and the shaping of the expressed Ig repertoire.
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