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Journal Abstract Search

518 related items for PubMed ID: 10397790

  • 1. A molecular dynamics simulation of the flavin mononucleotide-RNA aptamer complex.
    Schneider C, Sühnel J.
    Biopolymers; 1999 Sep; 50(3):287-302. PubMed ID: 10397790
    [Abstract] [Full Text] [Related]

  • 2. Molecular recognition in the FMN-RNA aptamer complex.
    Fan P, Suri AK, Fiala R, Live D, Patel DJ.
    J Mol Biol; 1996 May 10; 258(3):480-500. PubMed ID: 8642604
    [Abstract] [Full Text] [Related]

  • 3. Effect of the Insertion of a Glycine Residue into the Loop Spanning Residues 536-541 on the Semiquinone State and Redox Properties of the Flavin Mononucleotide-Binding Domain of Flavocytochrome P450BM-3 from Bacillus megaterium.
    Chen HC, Swenson RP.
    Biochemistry; 2008 Dec 30; 47(52):13788-99. PubMed ID: 19055322
    [Abstract] [Full Text] [Related]

  • 4. Water molecules in DNA recognition II: a molecular dynamics view of the structure and hydration of the trp operator.
    Bonvin AM, Sunnerhagen M, Otting G, van Gunsteren WF.
    J Mol Biol; 1998 Oct 02; 282(4):859-73. PubMed ID: 9743632
    [Abstract] [Full Text] [Related]

  • 5. NMR docking of the competitive inhibitor thymidine 3',5'-diphosphate into the X-ray structure of staphylococcal nuclease.
    Weber DJ, Serpersu EH, Gittis AG, Lattman EE, Mildvan AS.
    Proteins; 1993 Sep 02; 17(1):20-35. PubMed ID: 8234242
    [Abstract] [Full Text] [Related]

  • 6. Identification of a 14mer RNA that recognizes and binds flavin mononucleotide with high affinity.
    Anderson PC, Mecozzi S.
    Nucleic Acids Res; 2005 Sep 02; 33(22):6992-9. PubMed ID: 16377778
    [Abstract] [Full Text] [Related]

  • 7. Hydration of [d(CGC)r(aaa)d(TTTGCG)](2).
    Hsu ST, Chou MT, Chou SH, Huang WC, Cheng JW.
    J Mol Biol; 2000 Feb 04; 295(5):1129-37. PubMed ID: 10653692
    [Abstract] [Full Text] [Related]

  • 8. Statistical and molecular dynamics studies of buried waters in globular proteins.
    Park S, Saven JG.
    Proteins; 2005 Aug 15; 60(3):450-63. PubMed ID: 15937899
    [Abstract] [Full Text] [Related]

  • 9. Rules governing the orientation of the 2'-hydroxyl group in RNA.
    Auffinger P, Westhof E.
    J Mol Biol; 1997 Nov 21; 274(1):54-63. PubMed ID: 9398515
    [Abstract] [Full Text] [Related]

  • 10. RNA folding topology and intermolecular contacts in the AMP-RNA aptamer complex.
    Jiang F, Fiala R, Live D, Kumar RA, Patel DJ.
    Biochemistry; 1996 Oct 08; 35(40):13250-66. PubMed ID: 8855964
    [Abstract] [Full Text] [Related]

  • 11. Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs.
    Huang S, Wang YX, Draper DE.
    J Mol Biol; 1996 May 03; 258(2):308-21. PubMed ID: 8627628
    [Abstract] [Full Text] [Related]

  • 12. The midpoint potentials for the oxidized-semiquinone couple for Gly57 mutants of the Clostridium beijerinckii flavodoxin correlate with changes in the hydrogen-bonding interaction with the proton on N(5) of the reduced flavin mononucleotide cofactor as measured by NMR chemical shift temperature dependencies.
    Chang FC, Swenson RP.
    Biochemistry; 1999 Jun 01; 38(22):7168-76. PubMed ID: 10353827
    [Abstract] [Full Text] [Related]

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  • 15. Solution structure as a function of pH of two central mismatches, C . T and C . C, in the 29 to 39 K-ras gene sequence, by nuclear magnetic resonance and molecular dynamics.
    Boulard Y, Cognet JA, Fazakerley GV.
    J Mol Biol; 1997 May 02; 268(2):331-47. PubMed ID: 9159474
    [Abstract] [Full Text] [Related]

  • 16. Ab initio comprehensive conformational analysis of 2'-deoxyuridine, the biologically significant DNA minor nucleoside, and reconstruction of its low-temperature matrix infrared spectrum.
    Yurenko YP, Zhurakivsky RO, Ghomi M, Samijlenko SP, Hovorun DM.
    J Phys Chem B; 2008 Jan 31; 112(4):1240-50. PubMed ID: 18092770
    [Abstract] [Full Text] [Related]

  • 17. Theoretical studies of an exceptionally stable RNA tetraloop: observation of convergence from an incorrect NMR structure to the correct one using unrestrained molecular dynamics.
    Miller JL, Kollman PA.
    J Mol Biol; 1997 Jul 18; 270(3):436-50. PubMed ID: 9237909
    [Abstract] [Full Text] [Related]

  • 18. HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.
    Kieken F, Arnoult E, Barbault F, Paquet F, Huynh-Dinh T, Paoletti J, Genest D, Lancelot G.
    Eur Biophys J; 2002 Dec 18; 31(7):521-31. PubMed ID: 12451421
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  • 20. RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNA(Asp) anticodon hairpin.
    Auffinger P, Westhof E.
    J Mol Biol; 1997 Jun 13; 269(3):326-41. PubMed ID: 9199403
    [Abstract] [Full Text] [Related]

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