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Journal Abstract Search

173 related items for PubMed ID: 10542095

  • 1. A computational approach to simplifying the protein folding alphabet.
    Wang J, Wang W.
    Nat Struct Biol; 1999 Nov; 6(11):1033-8. PubMed ID: 10542095
    [Abstract] [Full Text] [Related]

  • 2. Folding alphabets.
    Chan HS.
    Nat Struct Biol; 1999 Nov; 6(11):994-6. PubMed ID: 10542084
    [Abstract] [Full Text] [Related]

  • 3. Designability of protein structures: a lattice-model study using the Miyazawa-Jernigan matrix.
    Li H, Tang C, Wingreen NS.
    Proteins; 2002 Nov 15; 49(3):403-12. PubMed ID: 12360530
    [Abstract] [Full Text] [Related]

  • 4. Accuracy of sequence alignment and fold assessment using reduced amino acid alphabets.
    Melo F, Marti-Renom MA.
    Proteins; 2006 Jun 01; 63(4):986-95. PubMed ID: 16506243
    [Abstract] [Full Text] [Related]

  • 5. What is the protein design alphabet?
    Dokholyan NV.
    Proteins; 2004 Mar 01; 54(4):622-8. PubMed ID: 14997558
    [Abstract] [Full Text] [Related]

  • 6. Effective connectivity profile: a structural representation that evidences the relationship between protein structures and sequences.
    Bastolla U, Ortíz AR, Porto M, Teichert F.
    Proteins; 2008 Dec 01; 73(4):872-88. PubMed ID: 18536008
    [Abstract] [Full Text] [Related]

  • 7. Accurate prediction for atomic-level protein design and its application in diversifying the near-optimal sequence space.
    Fromer M, Yanover C.
    Proteins; 2009 May 15; 75(3):682-705. PubMed ID: 19003998
    [Abstract] [Full Text] [Related]

  • 8. An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments.
    Yang AS, Honig B.
    J Mol Biol; 2000 Aug 18; 301(3):691-711. PubMed ID: 10966778
    [Abstract] [Full Text] [Related]

  • 9. Protein design with L- and D-alpha-amino acid structures as the alphabet.
    Durani S.
    Acc Chem Res; 2008 Oct 18; 41(10):1301-8. PubMed ID: 18642934
    [Abstract] [Full Text] [Related]

  • 10. Prediction of protein homo-oligomer types by pseudo amino acid composition: Approached with an improved feature extraction and Naive Bayes Feature Fusion.
    Zhang SW, Pan Q, Zhang HC, Shao ZC, Shi JY.
    Amino Acids; 2006 Jun 18; 30(4):461-8. PubMed ID: 16773245
    [Abstract] [Full Text] [Related]

  • 11. Probing possible downhill folding: native contact topology likely places a significant constraint on the folding cooperativity of proteins with approximately 40 residues.
    Badasyan A, Liu Z, Chan HS.
    J Mol Biol; 2008 Dec 12; 384(2):512-30. PubMed ID: 18823994
    [Abstract] [Full Text] [Related]

  • 12. Computational design of proteins stereochemically optimized in size, stability, and folding speed.
    Joshi S, Rana S, Wangikar P, Durani S.
    Biopolymers; 2006 Oct 05; 83(2):122-34. PubMed ID: 16683262
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  • 17. Entropy capacity determines protein folding.
    Galzitskaya OV, Garbuzynskiy SO.
    Proteins; 2006 Apr 01; 63(1):144-54. PubMed ID: 16400647
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  • 20. Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
    Tripet B, Wagschal K, Lavigne P, Mant CT, Hodges RS.
    J Mol Biol; 2000 Jul 07; 300(2):377-402. PubMed ID: 10873472
    [Abstract] [Full Text] [Related]

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