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Journal Abstract Search

652 related items for PubMed ID: 10860728

  • 1. NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.
    Amarasinghe GK, De Guzman RN, Turner RB, Summers MF.
    J Mol Biol; 2000 May 26; 299(1):145-56. PubMed ID: 10860728
    [Abstract] [Full Text] [Related]

  • 2. NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
    Amarasinghe GK, De Guzman RN, Turner RB, Chancellor KJ, Wu ZR, Summers MF.
    J Mol Biol; 2000 Aug 11; 301(2):491-511. PubMed ID: 10926523
    [Abstract] [Full Text] [Related]

  • 3. Stem-loop SL4 of the HIV-1 psi RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition.
    Amarasinghe GK, Zhou J, Miskimon M, Chancellor KJ, McDonald JA, Matthews AG, Miller RR, Rouse MD, Summers MF.
    J Mol Biol; 2001 Dec 14; 314(5):961-70. PubMed ID: 11743714
    [Abstract] [Full Text] [Related]

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  • 5. Identification of a high affinity nucleocapsid protein binding element within the Moloney murine leukemia virus Psi-RNA packaging signal: implications for genome recognition.
    D'Souza V, Melamed J, Habib D, Pullen K, Wallace K, Summers MF.
    J Mol Biol; 2001 Nov 23; 314(2):217-32. PubMed ID: 11718556
    [Abstract] [Full Text] [Related]

  • 6. Three-dimensional folding of an RNA hairpin required for packaging HIV-1.
    Pappalardo L, Kerwood DJ, Pelczer I, Borer PN.
    J Mol Biol; 1998 Oct 02; 282(4):801-18. PubMed ID: 9743628
    [Abstract] [Full Text] [Related]

  • 7. HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.
    Kieken F, Arnoult E, Barbault F, Paquet F, Huynh-Dinh T, Paoletti J, Genest D, Lancelot G.
    Eur Biophys J; 2002 Dec 02; 31(7):521-31. PubMed ID: 12451421
    [Abstract] [Full Text] [Related]

  • 8. NMR structure and dynamics of an RNA motif common to the spliceosome branch-point helix and the RNA-binding site for phage GA coat protein.
    Smith JS, Nikonowicz EP.
    Biochemistry; 1998 Sep 29; 37(39):13486-98. PubMed ID: 9753434
    [Abstract] [Full Text] [Related]

  • 9. Stem of SL1 RNA in HIV-1: structure and nucleocapsid protein binding for a 1 x 3 internal loop.
    Yuan Y, Kerwood DJ, Paoletti AC, Shubsda MF, Borer PN.
    Biochemistry; 2003 May 13; 42(18):5259-69. PubMed ID: 12731867
    [Abstract] [Full Text] [Related]

  • 10. NMR structure of the 101-nucleotide core encapsidation signal of the Moloney murine leukemia virus.
    D'Souza V, Dey A, Habib D, Summers MF.
    J Mol Biol; 2004 Mar 19; 337(2):427-42. PubMed ID: 15003457
    [Abstract] [Full Text] [Related]

  • 11. Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
    Chen X, McDowell JA, Kierzek R, Krugh TR, Turner DH.
    Biochemistry; 2000 Aug 01; 39(30):8970-82. PubMed ID: 10913310
    [Abstract] [Full Text] [Related]

  • 12. A quadruple mutant T4 RNA hairpin with the same structure as the wild-type translational repressor.
    Mirmira SR, Tinoco I.
    Biochemistry; 1996 Jun 18; 35(24):7675-83. PubMed ID: 8672468
    [Abstract] [Full Text] [Related]

  • 13. Solution structure of Cobalt(III)hexammine complexed to the GAAA tetraloop, and metal-ion binding to G.A mismatches.
    Rüdisser S, Tinoco I.
    J Mol Biol; 2000 Feb 04; 295(5):1211-23. PubMed ID: 10653698
    [Abstract] [Full Text] [Related]

  • 14. Insight into the intrinsic flexibility of the SL1 stem-loop from genomic RNA of HIV-1 as probed by molecular dynamics simulation.
    Mazier S, Genest D.
    Biopolymers; 2008 Mar 04; 89(3):187-96. PubMed ID: 18008323
    [Abstract] [Full Text] [Related]

  • 15. Structure of SL4 RNA from the HIV-1 packaging signal.
    Kerwood DJ, Cavaluzzi MJ, Borer PN.
    Biochemistry; 2001 Dec 04; 40(48):14518-29. PubMed ID: 11724565
    [Abstract] [Full Text] [Related]

  • 16. Functional sites in the 5' region of human immunodeficiency virus type 1 RNA form defined structural domains.
    Baudin F, Marquet R, Isel C, Darlix JL, Ehresmann B, Ehresmann C.
    J Mol Biol; 1993 Jan 20; 229(2):382-97. PubMed ID: 8429553
    [Abstract] [Full Text] [Related]

  • 17. Structure and function of the conserved 690 hairpin in Escherichia coli 16 S ribosomal RNA: analysis of the stem nucleotides.
    Morosyuk SV, Lee K, SantaLucia J, Cunningham PR.
    J Mol Biol; 2000 Jun 30; 300(1):113-26. PubMed ID: 10864503
    [Abstract] [Full Text] [Related]

  • 18. Structure and dimerization of HIV-1 kissing loop aptamers.
    Lodmell JS, Ehresmann C, Ehresmann B, Marquet R.
    J Mol Biol; 2001 Aug 17; 311(3):475-90. PubMed ID: 11493002
    [Abstract] [Full Text] [Related]

  • 19. Solution structure and thermodynamic investigation of the HIV-1 frameshift inducing element.
    Staple DW, Butcher SE.
    J Mol Biol; 2005 Jun 24; 349(5):1011-23. PubMed ID: 15927637
    [Abstract] [Full Text] [Related]

  • 20. RNA folding topology and intermolecular contacts in the AMP-RNA aptamer complex.
    Jiang F, Fiala R, Live D, Kumar RA, Patel DJ.
    Biochemistry; 1996 Oct 08; 35(40):13250-66. PubMed ID: 8855964
    [Abstract] [Full Text] [Related]

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