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286 related items for PubMed ID: 11063577

  • 21. Synthesis and characterization of the native anticodon domain of E. coli TRNA(Lys): simultaneous incorporation of modified nucleosides mnm(5)s(2)U, t(6)A, and pseudouridine using phosphoramidite chemistry.
    Sundaram M, Crain PF, Davis DR.
    J Org Chem; 2000 Sep 08; 65(18):5609-14. PubMed ID: 10970299
    [Abstract] [Full Text] [Related]

  • 22. Amino acid signature enables proteins to recognize modified tRNA.
    Spears JL, Xiao X, Hall CK, Agris PF.
    Biochemistry; 2014 Feb 25; 53(7):1125-33. PubMed ID: 24483944
    [Abstract] [Full Text] [Related]

  • 23. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 24. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 25. Unconventional structure of tRNA(Lys)SUU anticodon explains tRNA's role in bacterial and mammalian ribosomal frameshifting and primer selection by HIV-1.
    Agris PF, Guenther R, Ingram PC, Basti MM, Stuart JW, Sochacka E, Malkiewicz A.
    RNA; 1997 Apr 13; 3(4):420-8. PubMed ID: 9085848
    [Abstract] [Full Text] [Related]

  • 26. Modifications modulate anticodon loop dynamics and codon recognition of E. coli tRNA(Arg1,2).
    Cantara WA, Bilbille Y, Kim J, Kaiser R, Leszczyńska G, Malkiewicz A, Agris PF.
    J Mol Biol; 2012 Mar 02; 416(4):579-97. PubMed ID: 22240457
    [Abstract] [Full Text] [Related]

  • 27. An RNA complex of the HIV-1 A-loop and tRNA(Lys,3) is stabilized by nucleoside modifications.
    Bajji AC, Sundaram M, Myszka DG, Davis DR.
    J Am Chem Soc; 2002 Dec 04; 124(48):14302-3. PubMed ID: 12452693
    [Abstract] [Full Text] [Related]

  • 28. Preferences of AAA/AAG codon recognition by modified nucleosides, τm5s2U34 and t6A37 present in tRNALys.
    Sonawane KD, Kamble AS, Fandilolu PM.
    J Biomol Struct Dyn; 2018 Dec 04; 36(16):4182-4196. PubMed ID: 29243556
    [Abstract] [Full Text] [Related]

  • 29. E. coli glutamyl-tRNA synthetase is inhibited by anticodon stem-loop domains and a minihelix.
    Gustilo EM, Dubois DY, Lapointe J, Agris PF.
    RNA Biol; 2007 Jul 04; 4(2):85-92. PubMed ID: 17671438
    [Abstract] [Full Text] [Related]

  • 30. Molecular recognition mechanism of peptide chain bound to the tRNA(Lys3) anticodon loop in silico.
    Xiao X, Agris PF, Hall CK.
    J Biomol Struct Dyn; 2015 Jul 04; 33(1):14-27. PubMed ID: 24417415
    [Abstract] [Full Text] [Related]

  • 31. Analysis of action of wobble nucleoside modifications on codon-anticodon pairing within the ribosome.
    Lim VI.
    J Mol Biol; 1994 Jul 01; 240(1):8-19. PubMed ID: 8021943
    [Abstract] [Full Text] [Related]

  • 32. Simulation study of the ability of a computationally-designed peptide to recognize target tRNALys3 and other decoy tRNAs.
    Xiao X, Zhao B, Agris PF, Hall CK.
    Protein Sci; 2016 Dec 01; 25(12):2243-2255. PubMed ID: 27680513
    [Abstract] [Full Text] [Related]

  • 33. Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Nikonowicz EP.
    Nucleic Acids Res; 2005 Dec 01; 33(22):6961-71. PubMed ID: 16377777
    [Abstract] [Full Text] [Related]

  • 34. Single atom modification (O-->S) of tRNA confers ribosome binding.
    Ashraf SS, Sochacka E, Cain R, Guenther R, Malkiewicz A, Agris PF.
    RNA; 1999 Feb 01; 5(2):188-94. PubMed ID: 10024171
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  • 35. Physical Chemistry of a Single tRNA-Modified Nucleoside Regulates Decoding of the Synonymous Lysine Wobble Codon and Affects Type 2 Diabetes.
    Vangaveti S, Ranganathan SV, Agris PF.
    J Phys Chem B; 2022 Feb 17; 126(6):1168-1177. PubMed ID: 35119848
    [Abstract] [Full Text] [Related]

  • 36. An RNA model system for investigation of pseudouridine stabilization of the codon-anticodon interaction in tRNALys, tRNAHis and tRNATyr.
    Davis DR, Veltri CA, Nielsen L.
    J Biomol Struct Dyn; 1998 Jun 17; 15(6):1121-32. PubMed ID: 9669557
    [Abstract] [Full Text] [Related]

  • 37. Synthesis and biophysical characterization of tRNA(Lys,3) anticodon stem-loop RNAs containing the mcm(5)s(2)U nucleoside.
    Bajji AC, Davis DR.
    Org Lett; 2000 Nov 30; 2(24):3865-8. PubMed ID: 11101439
    [Abstract] [Full Text] [Related]

  • 38. The influence of hypermodified nucleosides lysidine and t(6)A to recognize the AUA codon instead of AUG: a molecular dynamics simulation study.
    Sonawane KD, Sambhare SB.
    Integr Biol (Camb); 2015 Nov 30; 7(11):1387-95. PubMed ID: 26215455
    [Abstract] [Full Text] [Related]

  • 39. Independent suppression of ribosomal +1 frameshifts by different tRNA anticodon loop modifications.
    Klassen R, Bruch A, Schaffrath R.
    RNA Biol; 2017 Sep 02; 14(9):1252-1259. PubMed ID: 27937809
    [Abstract] [Full Text] [Related]

  • 40. Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.
    Mucha P, Szyk A, Rekowski P, Weiss PA, Agris PF.
    Biochemistry; 2001 Nov 27; 40(47):14191-9. PubMed ID: 11714272
    [Abstract] [Full Text] [Related]

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