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Journal Abstract Search

73 related items for PubMed ID: 11099383

  • 1. Searching the protein structure databank with weak sequence patterns and structural constraints.
    Jonassen I, Eidhammer I, Grindhaug SH, Taylor WR.
    J Mol Biol; 2000 Dec 08; 304(4):599-619. PubMed ID: 11099383
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  • 2. Protein structure mining using a structural alphabet.
    Tyagi M, de Brevern AG, Srinivasan N, Offmann B.
    Proteins; 2008 May 01; 71(2):920-37. PubMed ID: 18004784
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  • 3. Three-dimensional structure analysis of PROSITE patterns.
    Kasuya A, Thornton JM.
    J Mol Biol; 1999 Mar 12; 286(5):1673-91. PubMed ID: 10064723
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  • 9. [A turning point in the knowledge of the structure-function-activity relations of elastin].
    Alix AJ.
    J Soc Biol; 2001 Mar 12; 195(2):181-93. PubMed ID: 11727705
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  • 12. A novel fold recognition method using composite predicted secondary structures.
    An Y, Friesner RA.
    Proteins; 2002 Aug 01; 48(2):352-66. PubMed ID: 12112702
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  • 13. Finding flexible patterns in unaligned protein sequences.
    Jonassen I, Collins JF, Higgins DG.
    Protein Sci; 1995 Aug 01; 4(8):1587-95. PubMed ID: 8520485
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  • 14. Fold recognition and accurate sequence-structure alignment of sequences directing beta-sheet proteins.
    McDonnell AV, Menke M, Palmer N, King J, Cowen L, Berger B.
    Proteins; 2006 Jun 01; 63(4):976-85. PubMed ID: 16547930
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  • 17. HYPROSP II--a knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence.
    Lin HN, Chang JM, Wu KP, Sung TY, Hsu WL.
    Bioinformatics; 2005 Aug 01; 21(15):3227-33. PubMed ID: 15932901
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  • 18. HMM-ModE--improved classification using profile hidden Markov models by optimising the discrimination threshold and modifying emission probabilities with negative training sequences.
    Srivastava PK, Desai DK, Nandi S, Lynn AM.
    BMC Bioinformatics; 2007 Mar 27; 8():104. PubMed ID: 17389042
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  • 19. AutoSCOP: automated prediction of SCOP classifications using unique pattern-class mappings.
    Gewehr JE, Hintermair V, Zimmer R.
    Bioinformatics; 2007 May 15; 23(10):1203-10. PubMed ID: 17379694
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