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Journal Abstract Search

206 related items for PubMed ID: 11325044

  • 1. Role of modified nucleosides of yeast tRNA(Phe) in ribosomal binding.
    Ashraf SS, Guenther RH, Ansari G, Malkiewicz A, Sochacka E, Agris PF.
    Cell Biochem Biophys; 2000; 33(3):241-52. PubMed ID: 11325044
    [Abstract] [Full Text] [Related]

  • 2. Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains.
    Ashraf SS, Guenther R, Agris PF.
    RNA; 1999 Sep; 5(9):1191-9. PubMed ID: 10496220
    [Abstract] [Full Text] [Related]

  • 3. Ribosomal binding of modified tRNA anticodons related to thermal stability.
    Ashraf SS, Guenther R, Ye W, Lee Y, Malkiewicz A, Agris PF.
    Nucleic Acids Symp Ser; 1997 Sep; (36):58-60. PubMed ID: 9478206
    [Abstract] [Full Text] [Related]

  • 4. Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.
    Mucha P, Szyk A, Rekowski P, Weiss PA, Agris PF.
    Biochemistry; 2001 Nov 27; 40(47):14191-9. PubMed ID: 11714272
    [Abstract] [Full Text] [Related]

  • 5. Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".
    Dao V, Guenther R, Malkiewicz A, Nawrot B, Sochacka E, Kraszewski A, Jankowska J, Everett K, Agris PF.
    Proc Natl Acad Sci U S A; 1994 Mar 15; 91(6):2125-9. PubMed ID: 7510886
    [Abstract] [Full Text] [Related]

  • 6. Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactions.
    Konevega AL, Soboleva NG, Makhno VI, Semenkov YP, Wintermeyer W, Rodnina MV, Katunin VI.
    RNA; 2004 Jan 15; 10(1):90-101. PubMed ID: 14681588
    [Abstract] [Full Text] [Related]

  • 7. Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain.
    Guenther RH, Bakal RS, Forrest B, Chen Y, Sengupta R, Nawrot B, Sochacka E, Jankowska J, Kraszewski A, Malkiewicz A.
    Biochimie; 1994 Jan 15; 76(12):1143-51. PubMed ID: 7748949
    [Abstract] [Full Text] [Related]

  • 8. Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.
    Yarian C, Marszalek M, Sochacka E, Malkiewicz A, Guenther R, Miskiewicz A, Agris PF.
    Biochemistry; 2000 Nov 07; 39(44):13390-5. PubMed ID: 11063576
    [Abstract] [Full Text] [Related]

  • 9. [Binding of a fragment of yeast phenylalanyl tRNA containing an anticodon loop with 30S and 70S ribosomes from Escherichia coli. The role of guanosine-42 in this interaction].
    Nekhaĭ SA, Saminskiĭ EM.
    Mol Biol (Mosk); 1994 Nov 07; 28(3):658-64. PubMed ID: 8052257
    [Abstract] [Full Text] [Related]

  • 10. Identification of specific Rp-phosphate oxygens in the tRNA anticodon loop required for ribosomal P-site binding.
    Schnitzer W, von Ahsen U.
    Proc Natl Acad Sci U S A; 1997 Nov 25; 94(24):12823-8. PubMed ID: 9371759
    [Abstract] [Full Text] [Related]

  • 11. [Interaction of deacylated phenylalanyl tRNA from yeasts with Escherichia coli ribosomes. The role of the modified nucleotide in codon-anticodon interaction].
    Katunin VI, Soboleva NG, Makhno VI, Sedel'nikova EA, Zhenodarova SM, Kirillov SV.
    Mol Biol (Mosk); 1994 Nov 25; 28(1):66-75. PubMed ID: 8145756
    [Abstract] [Full Text] [Related]

  • 12. On the binding of isolated yeast tRNA(Phe) anticodon arm to Escherichia coli 30S and 70S ribosomes. Guanosine-42 is important for the binding.
    Nekhai SA, Saminsky EM.
    Biochim Biophys Acta; 1994 May 17; 1218(1):21-6. PubMed ID: 8193162
    [Abstract] [Full Text] [Related]

  • 13. Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).
    Stuart JW, Koshlap KM, Guenther R, Agris PF.
    J Mol Biol; 2003 Dec 12; 334(5):901-18. PubMed ID: 14643656
    [Abstract] [Full Text] [Related]

  • 14. Conformational preferences and structural analysis of hypermodified nucleoside, peroxywybutosine (o2yW) found at 37th position in anticodon loop of tRNAPhe and its role in modulating UUC codon-anticodon interactions.
    Fandilolu PM, Kamble AS, Sambhare SB, Sonawane KD.
    Gene; 2018 Jan 30; 641():310-325. PubMed ID: 29107006
    [Abstract] [Full Text] [Related]

  • 15. Defects in tRNA Anticodon Loop 2'-O-Methylation Are Implicated in Nonsyndromic X-Linked Intellectual Disability due to Mutations in FTSJ1.
    Guy MP, Shaw M, Weiner CL, Hobson L, Stark Z, Rose K, Kalscheuer VM, Gecz J, Phizicky EM.
    Hum Mutat; 2015 Dec 30; 36(12):1176-87. PubMed ID: 26310293
    [Abstract] [Full Text] [Related]

  • 16. 5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
    Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.
    Biochemistry; 1993 Sep 28; 32(38):10249-53. PubMed ID: 8399153
    [Abstract] [Full Text] [Related]

  • 17. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 18. Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome.
    von Ahsen U, Green R, Schroeder R, Noller HF.
    RNA; 1997 Jan 17; 3(1):49-56. PubMed ID: 8990398
    [Abstract] [Full Text] [Related]

  • 19. Effect of the nucleotide-37 on the interaction of tRNA(Phe) with the P site of Escherichia coli ribosomes.
    Katunin V, Soboleva N, Mahkno V, Sedelnikova E, Zhenodarova S, Kirillov S.
    Biochimie; 1994 Jan 17; 76(1):51-7. PubMed ID: 7518255
    [Abstract] [Full Text] [Related]

  • 20. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb 17; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

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