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Journal Abstract Search
565 related items for PubMed ID: 11397084
1. Sequence-specific recognition of DNA in the nucleosome by pyrrole-imidazole polyamides. Gottesfeld JM, Melander C, Suto RK, Raviol H, Luger K, Dervan PB. J Mol Biol; 2001 Jun 08; 309(3):615-29. PubMed ID: 11397084 [Abstract] [Full Text] [Related]
2. Crystal structures of nucleosome core particles in complex with minor groove DNA-binding ligands. Suto RK, Edayathumangalam RS, White CL, Melander C, Gottesfeld JM, Dervan PB, Luger K. J Mol Biol; 2003 Feb 14; 326(2):371-80. PubMed ID: 12559907 [Abstract] [Full Text] [Related]
3. Blocking transcription through a nucleosome with synthetic DNA ligands. Gottesfeld JM, Belitsky JM, Melander C, Dervan PB, Luger K. J Mol Biol; 2002 Aug 09; 321(2):249-63. PubMed ID: 12144782 [Abstract] [Full Text] [Related]
4. Effects of the N-terminal acylamido group of imidazole- and pyrrole-containing polyamides on DNA sequence specificity and binding affinity. Westrate L, Mackay H, Brown T, Nguyen B, Kluza J, Wilson WD, Lee M, Hartley JA. Biochemistry; 2009 Jun 23; 48(24):5679-88. PubMed ID: 19419200 [Abstract] [Full Text] [Related]
5. Solvent mediated interactions in the structure of the nucleosome core particle at 1.9 a resolution. Davey CA, Sargent DF, Luger K, Maeder AW, Richmond TJ. J Mol Biol; 2002 Jun 21; 319(5):1097-113. PubMed ID: 12079350 [Abstract] [Full Text] [Related]
6. Targeting the inverted CCAAT box 2 in the topoisomerase IIalpha promoter by JH-37, an imidazole-pyrrole polyamide hairpin: design, synthesis, molecular biology, and biophysical studies. Henry JA, Le NM, Nguyen B, Howard CM, Bailey SL, Horick SM, Buchmueller KL, Kotecha M, Hochhauser D, Hartley JA, Wilson WD, Lee M. Biochemistry; 2004 Sep 28; 43(38):12249-57. PubMed ID: 15379563 [Abstract] [Full Text] [Related]
7. DNA distortion as a factor in nucleosome positioning. Fitzgerald DJ, Anderson JN. J Mol Biol; 1999 Oct 29; 293(3):477-91. PubMed ID: 10543944 [Abstract] [Full Text] [Related]
8. Two DNA-binding sites on the globular domain of histone H5 are required for binding to both bulk and 5 S reconstituted nucleosomes. Duggan MM, Thomas JO. J Mol Biol; 2000 Nov 17; 304(1):21-33. PubMed ID: 11071807 [Abstract] [Full Text] [Related]
9. The mouse mammary tumour virus promoter positioned on a tetramer of histones H3 and H4 binds nuclear factor 1 and OTF1. Spangenberg C, Eisfeld K, Stünkel W, Luger K, Flaus A, Richmond TJ, Truss M, Beato M. J Mol Biol; 1998 May 15; 278(4):725-39. PubMed ID: 9614938 [Abstract] [Full Text] [Related]
10. Effects of the A.T/T.A degeneracy of pyrrole--imidazole polyamide recognition in the minor groove of DNA. White S, Baird EE, Dervan PB. Biochemistry; 1996 Sep 24; 35(38):12532-7. PubMed ID: 8823190 [Abstract] [Full Text] [Related]
11. Extending the language of DNA molecular recognition by polyamides: unexpected influence of imidazole and pyrrole arrangement on binding affinity and specificity. Buchmueller KL, Staples AM, Howard CM, Horick SM, Uthe PB, Le NM, Cox KK, Nguyen B, Pacheco KA, Wilson WD, Lee M. J Am Chem Soc; 2005 Jan 19; 127(2):742-50. PubMed ID: 15643900 [Abstract] [Full Text] [Related]
12. Sequence recognition in the minor groove of DNA by covalently linked formamido imidazole-pyrrole-imidazole polyamides: effect of H-pin linkage and linker length on selectivity and affinity. O'Hare CC, Uthe P, Mackay H, Blackmon K, Jones J, Brown T, Nguyen B, Wilson WD, Lee M, Hartley JA. Biochemistry; 2007 Oct 23; 46(42):11661-70. PubMed ID: 17910471 [Abstract] [Full Text] [Related]
13. Combinatorial determination of sequence specificity for nanomolar DNA-binding hairpin polyamides. Vashisht Gopal YN, Van Dyke MW. Biochemistry; 2003 Jun 10; 42(22):6891-903. PubMed ID: 12779344 [Abstract] [Full Text] [Related]
14. Specific contributions of histone tails and their acetylation to the mechanical stability of nucleosomes. Brower-Toland B, Wacker DA, Fulbright RM, Lis JT, Kraus WL, Wang MD. J Mol Biol; 2005 Feb 11; 346(1):135-46. PubMed ID: 15663933 [Abstract] [Full Text] [Related]
15. Substrate structure influences binding of the non-histone protein HMG-I(Y) to free nucleosomal DNA. Reeves R, Wolffe AP. Biochemistry; 1996 Apr 16; 35(15):5063-74. PubMed ID: 8664299 [Abstract] [Full Text] [Related]
16. DNA recognition and nucleosome organization. Travers A, Drew H. Biopolymers; 1997 Apr 16; 44(4):423-33. PubMed ID: 9782778 [Abstract] [Full Text] [Related]
17. Sequence dependence of translational positioning of core nucleosomes. Negri R, Buttinelli M, Panetta G, De Arcangelis V, Di Mauro E, Travers A. J Mol Biol; 2001 Apr 06; 307(4):987-99. PubMed ID: 11286550 [Abstract] [Full Text] [Related]
18. Expanding the repertoire of heterocycle ring pairs for programmable minor groove DNA recognition. Marques MA, Doss RM, Foister S, Dervan PB. J Am Chem Soc; 2004 Aug 25; 126(33):10339-49. PubMed ID: 15315448 [Abstract] [Full Text] [Related]
19. Anti-repression of RNA polymerase II transcription by pyrrole-imidazole polyamides. Dickinson LA, Trauger JW, Baird EE, Ghazal P, Dervan PB, Gottesfeld JM. Biochemistry; 1999 Aug 17; 38(33):10801-7. PubMed ID: 10451376 [Abstract] [Full Text] [Related]
20. Structure and dynamics of nucleosomal DNA. Muthurajan UM, Park YJ, Edayathumangalam RS, Suto RK, Chakravarthy S, Dyer PN, Luger K. Biopolymers; 2003 Apr 17; 68(4):547-56. PubMed ID: 12666179 [Abstract] [Full Text] [Related] Page: [Next] [New Search]