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206 related items for PubMed ID: 11444376
1. Electronic properties of the amino acid side chains contribute to the structural preferences in protein folding. Dwyer DS. J Biomol Struct Dyn; 2001 Jun; 18(6):881-92. PubMed ID: 11444376 [Abstract] [Full Text] [Related]
2. Nearest-neighbor effects and structural preferences in dipeptides are a function of the electronic properties of amino acid side-chains. Dwyer DS. Proteins; 2006 Jun 01; 63(4):939-48. PubMed ID: 16477601 [Abstract] [Full Text] [Related]
3. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins. Avbelj F. J Mol Biol; 2000 Jul 28; 300(5):1335-59. PubMed ID: 10903873 [Abstract] [Full Text] [Related]
4. Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins. Moelbert S, Emberly E, Tang C. Protein Sci; 2004 Mar 28; 13(3):752-62. PubMed ID: 14767075 [Abstract] [Full Text] [Related]
5. Effect of charged amino acid side chain length on lateral cross-strand interactions between carboxylate- and guanidinium-containing residues in a β-hairpin. Kuo HT, Liu SL, Chiu WC, Fang CJ, Chang HC, Wang WR, Yang PA, Li JH, Huang SJ, Huang SL, Cheng RP. Amino Acids; 2015 May 28; 47(5):885-98. PubMed ID: 25646959 [Abstract] [Full Text] [Related]
8. Classification of amino acids based on statistical results of known structures and cooperativity of protein folding. Chen H, Zhou X, Ou-Yang ZC. Phys Rev E Stat Nonlin Soft Matter Phys; 2002 Jun 28; 65(6 Pt 1):061907. PubMed ID: 12188759 [Abstract] [Full Text] [Related]
10. How the folding rates of two- and multistate proteins depend on the amino acid properties. Huang JT, Huang W, Huang SR, Li X. Proteins; 2014 Oct 28; 82(10):2375-82. PubMed ID: 24810705 [Abstract] [Full Text] [Related]
11. Free energies of amino acid side-chain rotamers in alpha-helices, beta-sheets and alpha-helix N-caps. Stapley BJ, Doig AJ. J Mol Biol; 1997 Sep 26; 272(3):456-64. PubMed ID: 9325103 [Abstract] [Full Text] [Related]
13. Interactions between hydrophobic side chains within alpha-helices. Creamer TP, Rose GD. Protein Sci; 1995 Jul 26; 4(7):1305-14. PubMed ID: 7670373 [Abstract] [Full Text] [Related]
19. Analysis on folding of misgurin using two-dimensional HP model. Yan S, Wu G. Proteins; 2012 Mar 26; 80(3):764-73. PubMed ID: 22113728 [Abstract] [Full Text] [Related]