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Journal Abstract Search

206 related items for PubMed ID: 11444376

  • 41. Position-dependent effects of fluorinated amino acids on the hydrophobic core formation of a heterodimeric coiled coil.
    Salwiczek M, Samsonov S, Vagt T, Nyakatura E, Fleige E, Numata J, Cölfen H, Pisabarro MT, Koksch B.
    Chemistry; 2009 Aug 03; 15(31):7628-36. PubMed ID: 19579235
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  • 42. Tryptophan rich peptides: influence of indole rings on backbone conformation.
    Mahalakshmi R, Sengupta A, Raghothama S, Shamala N, Balaram P.
    Biopolymers; 2007 Aug 03; 88(1):36-54. PubMed ID: 17091496
    [Abstract] [Full Text] [Related]

  • 43. Stability of cyclic beta-hairpins: asymmetric contributions from side chains of a hydrogen-bonded cross-strand residue pair.
    Russell SJ, Blandl T, Skelton NJ, Cochran AG.
    J Am Chem Soc; 2003 Jan 15; 125(2):388-95. PubMed ID: 12517150
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  • 44. The role of hydrophobic interactions in initiation and propagation of protein folding.
    Dyson HJ, Wright PE, Scheraga HA.
    Proc Natl Acad Sci U S A; 2006 Aug 29; 103(35):13057-61. PubMed ID: 16916929
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  • 45. Deciphering the Fluorine Code-The Many Hats Fluorine Wears in a Protein Environment.
    Berger AA, Völler JS, Budisa N, Koksch B.
    Acc Chem Res; 2017 Sep 19; 50(9):2093-2103. PubMed ID: 28803466
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  • 46. Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".
    Tripet B, Wagschal K, Lavigne P, Mant CT, Hodges RS.
    J Mol Biol; 2000 Jul 07; 300(2):377-402. PubMed ID: 10873472
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  • 47. Protein folding kinetics provides a context-independent assessment of beta-strand propensity in the Fyn SH3 domain.
    Zarrine-Afsar A, Dahesh S, Davidson AR.
    J Mol Biol; 2007 Oct 26; 373(3):764-74. PubMed ID: 17850820
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  • 48. Effect of charged amino acid side chain length at non-hydrogen bonded strand positions on β-hairpin stability.
    Kuo LH, Li JH, Kuo HT, Hung CY, Tsai HY, Chiu WC, Wu CH, Wang WR, Yang PA, Yao YC, Wong TW, Huang SJ, Huang SL, Cheng RP.
    Biochemistry; 2013 Nov 05; 52(44):7785-97. PubMed ID: 24156236
    [Abstract] [Full Text] [Related]

  • 49. Differences in the amino acid distributions of 3(10)-helices and alpha-helices.
    Karpen ME, de Haseth PL, Neet KE.
    Protein Sci; 1992 Oct 05; 1(10):1333-42. PubMed ID: 1303752
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  • 50. Salt effects on hydrophobic interaction and charge screening in the folding of a negatively charged peptide to a coiled coil (leucine zipper).
    Jelesarov I, Dürr E, Thomas RM, Bosshard HR.
    Biochemistry; 1998 May 19; 37(20):7539-50. PubMed ID: 9585569
    [Abstract] [Full Text] [Related]

  • 51. Fuzzy cluster analysis of simple physicochemical properties of amino acids for recognizing secondary structure in proteins.
    Mocz G.
    Protein Sci; 1995 Jun 19; 4(6):1178-87. PubMed ID: 7549882
    [Abstract] [Full Text] [Related]

  • 52. Protein-protein interfaces: architectures and interactions in protein-protein interfaces and in protein cores. Their similarities and differences.
    Tsai CJ, Lin SL, Wolfson HJ, Nussinov R.
    Crit Rev Biochem Mol Biol; 1996 Apr 19; 31(2):127-52. PubMed ID: 8740525
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  • 53. Fluorinated amino acids: compatibility with native protein structures and effects on protein-protein interactions.
    Salwiczek M, Nyakatura EK, Gerling UI, Ye S, Koksch B.
    Chem Soc Rev; 2012 Mar 21; 41(6):2135-71. PubMed ID: 22130572
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  • 54. Characteristic features of amino acid residues in coiled-coil protein structures.
    Gromiha MM, Parry DA.
    Biophys Chem; 2004 Oct 01; 111(2):95-103. PubMed ID: 15381307
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  • 55. Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease.
    Xie T, Liu D, Feng Y, Shan L, Wang J.
    Biophys J; 2007 Mar 15; 92(6):2090-107. PubMed ID: 17172296
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  • 56. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B, Nussinov R.
    J Mol Biol; 2000 Mar 03; 296(4):1091-104. PubMed ID: 10686106
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  • 57. Stability and amino acid preferences of type VIII reverse turn: the most common turn in peptides?
    Santa H, Ylisirniö M, Hassinen T, Laatikainen R, Peräkylä M.
    Protein Eng; 2002 Aug 03; 15(8):651-7. PubMed ID: 12364579
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  • 58. Addition of side-chain interactions to 3(10)-helix/coil and alpha-helix/3(10)-helix/coil theory.
    Sun JK, Doig AJ.
    Protein Sci; 1998 Nov 03; 7(11):2374-83. PubMed ID: 9828003
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  • 59. Fine structure analysis of a protein folding transition state; distinguishing between hydrophobic stabilization and specific packing.
    Anil B, Sato S, Cho JH, Raleigh DP.
    J Mol Biol; 2005 Dec 02; 354(3):693-705. PubMed ID: 16246369
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  • 60. Importance of native-state topology for determining the folding rate of two-state proteins.
    Gromiha MM.
    J Chem Inf Comput Sci; 2003 Dec 02; 43(5):1481-5. PubMed ID: 14502481
    [Abstract] [Full Text] [Related]

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