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157 related items for PubMed ID: 11686704

  • 1. Molecular dynamics simulations of pressure effects on hydrophobic interactions.
    Ghosh T, García AE, Garde S.
    J Am Chem Soc; 2001 Nov 07; 123(44):10997-1003. PubMed ID: 11686704
    [Abstract] [Full Text] [Related]

  • 2. Potential of mean force between hydrophobic solutes in the Jagla model of water and implications for cold denaturation of proteins.
    Maiti M, Weiner S, Buldyrev SV, Stanley HE, Sastry S.
    J Chem Phys; 2012 Jan 28; 136(4):044512. PubMed ID: 22299896
    [Abstract] [Full Text] [Related]

  • 3. Effect of trimethylamine-N-oxide on pressure-induced dissolution of hydrophobic solute.
    Sarma R, Paul S.
    J Chem Phys; 2012 Sep 21; 137(11):114503. PubMed ID: 22998267
    [Abstract] [Full Text] [Related]

  • 4. Potential of mean force of hydrophobic association: dependence on solute size.
    Sobolewski E, Makowski M, Czaplewski C, Liwo A, Ołdziej S, Scheraga HA.
    J Phys Chem B; 2007 Sep 13; 111(36):10765-74. PubMed ID: 17713937
    [Abstract] [Full Text] [Related]

  • 5. Origins of protein denatured state compactness and hydrophobic clustering in aqueous urea: inferences from nonpolar potentials of mean force.
    Shimizu S, Chan HS.
    Proteins; 2002 Dec 01; 49(4):560-6. PubMed ID: 12402364
    [Abstract] [Full Text] [Related]

  • 6. Molecular origin of anticooperativity in hydrophobic association.
    Czaplewski C, Liwo A, Ripoll DR, Scheraga HA.
    J Phys Chem B; 2005 Apr 28; 109(16):8108-19. PubMed ID: 16851948
    [Abstract] [Full Text] [Related]

  • 7. Effect of pressure on conformational equilibria of 1-chloropropane and 1-bromopropane in water and organic solvents: a Raman spectroscopic study.
    Kasezawa K, Kato M.
    J Phys Chem B; 2009 Jun 25; 113(25):8607-12. PubMed ID: 19534564
    [Abstract] [Full Text] [Related]

  • 8. The effect of aqueous solutions of trimethylamine-N-oxide on pressure induced modifications of hydrophobic interactions.
    Sarma R, Paul S.
    J Chem Phys; 2012 Sep 07; 137(9):094502. PubMed ID: 22957576
    [Abstract] [Full Text] [Related]

  • 9. Molecular dynamics study on hydrophobic effects in aqueous urea solutions.
    Ikeguchi M, Nakamura S, Shimizu K.
    J Am Chem Soc; 2001 Jan 31; 123(4):677-82. PubMed ID: 11456580
    [Abstract] [Full Text] [Related]

  • 10. Quantifying water density fluctuations and compressibility of hydration shells of hydrophobic solutes and proteins.
    Sarupria S, Garde S.
    Phys Rev Lett; 2009 Jul 17; 103(3):037803. PubMed ID: 19659321
    [Abstract] [Full Text] [Related]

  • 11. Contributions of solvent-solvent hydrogen bonding and van der Waals interactions to the attraction between methane molecules in water.
    Rank JA, Baker D.
    Biophys Chem; 1998 Apr 20; 71(2-3):199-204. PubMed ID: 9648207
    [Abstract] [Full Text] [Related]

  • 12. The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.
    Hummer G, Garde S, García AE, Paulaitis ME, Pratt LR.
    Proc Natl Acad Sci U S A; 1998 Feb 17; 95(4):1552-5. PubMed ID: 9465053
    [Abstract] [Full Text] [Related]

  • 13. On the thermodynamics and kinetics of hydrophobic interactions at interfaces.
    Vembanur S, Patel AJ, Sarupria S, Garde S.
    J Phys Chem B; 2013 Sep 05; 117(35):10261-70. PubMed ID: 23906438
    [Abstract] [Full Text] [Related]

  • 14. Anti-cooperativity and cooperativity in hydrophobic interactions: Three-body free energy landscapes and comparison with implicit-solvent potential functions for proteins.
    Shimizu S, Chan HS.
    Proteins; 2002 Jul 01; 48(1):15-30. PubMed ID: 12012334
    [Abstract] [Full Text] [Related]

  • 15. Towards temperature-dependent coarse-grained potentials of side-chain interactions for protein folding simulations. I: molecular dynamics study of a pair of methane molecules in water at various temperatures.
    Sobolewski E, Makowski M, Oldziej S, Czaplewski C, Liwo A, Scheraga HA.
    Protein Eng Des Sel; 2009 Sep 01; 22(9):547-52. PubMed ID: 19556395
    [Abstract] [Full Text] [Related]

  • 16. Temperature dependence of three-body hydrophobic interactions: potential of mean force, enthalpy, entropy, heat capacity, and nonadditivity.
    Moghaddam MS, Shimizu S, Chan HS.
    J Am Chem Soc; 2005 Jan 12; 127(1):303-16. PubMed ID: 15631480
    [Abstract] [Full Text] [Related]

  • 17. A nucleation-based method to study hydrophobic interactions under confinement: enhanced hydrophobic association driven by energetic contributions.
    Kim H, Keasler SJ, Chen B.
    J Phys Chem B; 2014 Jun 19; 118(24):6875-84. PubMed ID: 24853272
    [Abstract] [Full Text] [Related]

  • 18. Microscopic mechanism for cold denaturation.
    Dias CL, Ala-Nissila T, Karttunen M, Vattulainen I, Grant M.
    Phys Rev Lett; 2008 Mar 21; 100(11):118101. PubMed ID: 18517830
    [Abstract] [Full Text] [Related]

  • 19. Hydrophobic interactions between methane and a nanoscopic pocket: three dimensional distribution of potential of mean force revealed by computer simulations.
    Setny P.
    J Chem Phys; 2008 Mar 28; 128(12):125105. PubMed ID: 18376980
    [Abstract] [Full Text] [Related]

  • 20. Quantification of the hydrophobic interaction by simulations of the aggregation of small hydrophobic solutes in water.
    Raschke TM, Tsai J, Levitt M.
    Proc Natl Acad Sci U S A; 2001 May 22; 98(11):5965-9. PubMed ID: 11353861
    [Abstract] [Full Text] [Related]

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