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Journal Abstract Search

257 related items for PubMed ID: 11714272

  • 1. Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide.
    Mucha P, Szyk A, Rekowski P, Weiss PA, Agris PF.
    Biochemistry; 2001 Nov 27; 40(47):14191-9. PubMed ID: 11714272
    [Abstract] [Full Text] [Related]

  • 2. Aminoacyl-tRNA synthetase and U54 methyltransferase recognize conformations of the yeast tRNA(Phe) anticodon and T stem/loop domain.
    Guenther RH, Bakal RS, Forrest B, Chen Y, Sengupta R, Nawrot B, Sochacka E, Jankowska J, Kraszewski A, Malkiewicz A.
    Biochimie; 1994 Nov 27; 76(12):1143-51. PubMed ID: 7748949
    [Abstract] [Full Text] [Related]

  • 3. Role of modified nucleosides of yeast tRNA(Phe) in ribosomal binding.
    Ashraf SS, Guenther RH, Ansari G, Malkiewicz A, Sochacka E, Agris PF.
    Cell Biochem Biophys; 2000 Nov 27; 33(3):241-52. PubMed ID: 11325044
    [Abstract] [Full Text] [Related]

  • 4. Naturally-occurring modification restricts the anticodon domain conformational space of tRNA(Phe).
    Stuart JW, Koshlap KM, Guenther R, Agris PF.
    J Mol Biol; 2003 Dec 12; 334(5):901-18. PubMed ID: 14643656
    [Abstract] [Full Text] [Related]

  • 5. Specificity of phage display selected peptides for modified anticodon stem and loop domains of tRNA.
    Eshete M, Marchbank MT, Deutscher SL, Sproat B, Leszczynska G, Malkiewicz A, Agris PF.
    Protein J; 2007 Jan 12; 26(1):61-73. PubMed ID: 17237992
    [Abstract] [Full Text] [Related]

  • 6. Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains.
    Ashraf SS, Guenther R, Agris PF.
    RNA; 1999 Sep 12; 5(9):1191-9. PubMed ID: 10496220
    [Abstract] [Full Text] [Related]

  • 7. 5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA.
    Chen Y, Sierzputowska-Gracz H, Guenther R, Everett K, Agris PF.
    Biochemistry; 1993 Sep 28; 32(38):10249-53. PubMed ID: 8399153
    [Abstract] [Full Text] [Related]

  • 8. Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Sundaram M, Durant PC, Davis DR.
    Biochemistry; 2000 Oct 17; 39(41):12575-84. PubMed ID: 11027137
    [Abstract] [Full Text] [Related]

  • 9. E. coli glutamyl-tRNA synthetase is inhibited by anticodon stem-loop domains and a minihelix.
    Gustilo EM, Dubois DY, Lapointe J, Agris PF.
    RNA Biol; 2007 Jul 17; 4(2):85-92. PubMed ID: 17671438
    [Abstract] [Full Text] [Related]

  • 10. The role of 5-methylcytidine in the anticodon arm of yeast tRNA(Phe): site-specific Mg2+ binding and coupled conformational transition in DNA analogs.
    Dao V, Guenther RH, Agris PF.
    Biochemistry; 1992 Nov 17; 31(45):11012-9. PubMed ID: 1445839
    [Abstract] [Full Text] [Related]

  • 11. S. cerevisiae Trm140 has two recognition modes for 3-methylcytidine modification of the anticodon loop of tRNA substrates.
    Han L, Marcus E, D'Silva S, Phizicky EM.
    RNA; 2017 Mar 17; 23(3):406-419. PubMed ID: 28003514
    [Abstract] [Full Text] [Related]

  • 12. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb 17; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

  • 13. Ribosomal binding of modified tRNA anticodons related to thermal stability.
    Ashraf SS, Guenther R, Ye W, Lee Y, Malkiewicz A, Agris PF.
    Nucleic Acids Symp Ser; 1997 Feb 17; (36):58-60. PubMed ID: 9478206
    [Abstract] [Full Text] [Related]

  • 14. Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".
    Dao V, Guenther R, Malkiewicz A, Nawrot B, Sochacka E, Kraszewski A, Jankowska J, Everett K, Agris PF.
    Proc Natl Acad Sci U S A; 1994 Mar 15; 91(6):2125-9. PubMed ID: 7510886
    [Abstract] [Full Text] [Related]

  • 15. Sequence-altered peptide adopts optimum conformation for modification-dependent binding of the yeast tRNAPhe anticodon domain.
    Mucha P, Szyk A, Rekowski P, Agris PF.
    Protein J; 2004 Jan 15; 23(1):33-8. PubMed ID: 15115180
    [Abstract] [Full Text] [Related]

  • 16. Functional recognition of the modified human tRNALys3(UUU) anticodon domain by HIV's nucleocapsid protein and a peptide mimic.
    Graham WD, Barley-Maloney L, Stark CJ, Kaur A, Stolarchuk C, Sproat B, Leszczynska G, Malkiewicz A, Safwat N, Mucha P, Guenther R, Agris PF.
    J Mol Biol; 2011 Jul 22; 410(4):698-715. PubMed ID: 21762809
    [Abstract] [Full Text] [Related]

  • 17. [Binding of a fragment of yeast phenylalanyl tRNA containing an anticodon loop with 30S and 70S ribosomes from Escherichia coli. The role of guanosine-42 in this interaction].
    Nekhaĭ SA, Saminskiĭ EM.
    Mol Biol (Mosk); 1994 Jul 22; 28(3):658-64. PubMed ID: 8052257
    [Abstract] [Full Text] [Related]

  • 18. Conformational preferences and structural analysis of hypermodified nucleoside, peroxywybutosine (o2yW) found at 37th position in anticodon loop of tRNAPhe and its role in modulating UUC codon-anticodon interactions.
    Fandilolu PM, Kamble AS, Sambhare SB, Sonawane KD.
    Gene; 2018 Jan 30; 641():310-325. PubMed ID: 29107006
    [Abstract] [Full Text] [Related]

  • 19. The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
    Goldgur Y, Mosyak L, Reshetnikova L, Ankilova V, Lavrik O, Khodyreva S, Safro M.
    Structure; 1997 Jan 15; 5(1):59-68. PubMed ID: 9016717
    [Abstract] [Full Text] [Related]

  • 20. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

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