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168 related items for PubMed ID: 11843625

  • 1. Conformational preferences of anticodon 3'-adjacent hypermodified nucleic acid base cis-or trans-zeatin and its 2-methylthio derivative, cis-or trans- ms(2)zeatin.
    Sonawane KD, Sonavane UB, Tewari R.
    J Biomol Struct Dyn; 2002 Feb; 19(4):637-48. PubMed ID: 11843625
    [Abstract] [Full Text] [Related]

  • 2. Conformational preferences of modified nucleic acid bases N6-methyl-N6-(N-threonylcarbonyl) adenine and 2-methylthio-N6-(N-threonylcarbonyl) adenine by the quantum chemical PCILO calculations.
    Tewari R.
    J Biomol Struct Dyn; 1990 Dec; 8(3):675-86. PubMed ID: 2129236
    [Abstract] [Full Text] [Related]

  • 3. Conformational preferences of hypermodified nucleoside lysidine (k2C) occurring at "wobble" position in anticodon loop of tRNA(Ile).
    Sonawane KD, Tewari R.
    Nucleosides Nucleotides Nucleic Acids; 2008 Oct; 27(10):1158-74. PubMed ID: 18788046
    [Abstract] [Full Text] [Related]

  • 4. Conformational preferences of the base substituent in hypermodified nucleotide queuosine 5'-monophosphate 'pQ' and protonated variant 'pQH+'.
    Sonavane UB, Sonawane KD, Tewari R.
    J Biomol Struct Dyn; 2002 Dec; 20(3):473-85. PubMed ID: 12437386
    [Abstract] [Full Text] [Related]

  • 5. Structural significance of hypermodified nucleic acid base hydroxywybutine (OHyW) which occur at 37th position in the anticodon loop of yeast tRNA(Phe).
    Kumbhar NM, Kumbhar BV, Sonawane KD.
    J Mol Graph Model; 2012 Sep; 38():174-85. PubMed ID: 23073221
    [Abstract] [Full Text] [Related]

  • 6. Conformational preferences of modified nucleoside N(2)-methylguanosine (m(2)G) and its derivative N(2), N(2)-dimethylguanosine (m(2)(2)G) occur at 26th position (hinge region) in tRNA.
    Bavi RS, Kamble AD, Kumbhar NM, Kumbhar BV, Sonawane KD.
    Cell Biochem Biophys; 2011 Dec; 61(3):507-21. PubMed ID: 21735129
    [Abstract] [Full Text] [Related]

  • 7. Iso-energetic multiple conformations of hypermodified nucleic acid base wybutine (yW) which occur at 37(th) position in anticodon loop of tRNA(Phe).
    Kumbhar NM, Sonawane KD.
    J Mol Graph Model; 2011 Jun; 29(7):935-46. PubMed ID: 21530341
    [Abstract] [Full Text] [Related]

  • 8. Conformational preferences of modified nucleoside N(4)-acetylcytidine, ac4C occur at "wobble" 34th position in the anticodon loop of tRNA.
    Kumbhar BV, Kamble AD, Sonawane KD.
    Cell Biochem Biophys; 2013 Jul; 66(3):797-816. PubMed ID: 23408308
    [Abstract] [Full Text] [Related]

  • 9. Cobalt(III) complexes of monodentate N9-bound adeninate (ade-), [Co(ade-kappaN9)Cl(en)2]+ (en = 1,2-diaminoethane): syntheses, crystal structures, and protonation behaviors of the geometrical isomers.
    Suzuki T, Hirai Y, Monjushiro H, Kaizaki S.
    Inorg Chem; 2004 Oct 04; 43(20):6435-44. PubMed ID: 15446895
    [Abstract] [Full Text] [Related]

  • 10. Intramolecular hydrogen bond-controlled prolyl amide isomerization in glucosyl 3'(S)-hydroxy-5'-hydroxymethylproline hybrids: influence of a C-5'-hydroxymethyl substituent on the thermodynamics and kinetics of prolyl amide cis/trans isomerization.
    Zhang K, Teklebrhan RB, Schreckenbach G, Wetmore S, Schweizer F.
    J Org Chem; 2009 May 15; 74(10):3735-43. PubMed ID: 19354261
    [Abstract] [Full Text] [Related]

  • 11. tRNA anticodons with the modified nucleoside 2-methylthio-N6-(4-hydroxyisopentenyl)adenosine distinguish between bases 3' of the codon.
    Ericson JU, Björk GR.
    J Mol Biol; 1991 Apr 05; 218(3):509-16. PubMed ID: 2016742
    [Abstract] [Full Text] [Related]

  • 12. Structural Significance of Conformational Preferences and Ribose-Ring-Puckering of Hyper Modified Nucleotide 5'-Monophosphate 2-Methylthio Cyclic N6-Threonylcarbamoyladenosine (p-ms2ct6A) Present at 37th Position in Anticodon Loop of tRNALys.
    Dound AS, Fandilolu PM, Sonawane KD.
    Cell Biochem Biophys; 2022 Dec 05; 80(4):665-680. PubMed ID: 35965304
    [Abstract] [Full Text] [Related]

  • 13. Structural bioinformatics analysis of enzymes involved in the biosynthesis pathway of the hypermodified nucleoside ms(2)io(6)A37 in tRNA.
    Kaminska KH, Baraniak U, Boniecki M, Nowaczyk K, Czerwoniec A, Bujnicki JM.
    Proteins; 2008 Jan 01; 70(1):1-18. PubMed ID: 17910062
    [Abstract] [Full Text] [Related]

  • 14. The methylthio group (ms2) of N6-(4-hydroxyisopentenyl)-2-methylthioadenosine (ms2io6A) present next to the anticodon contributes to the decoding efficiency of the tRNA.
    Esberg B, Björk GR.
    J Bacteriol; 1995 Apr 01; 177(8):1967-75. PubMed ID: 7536729
    [Abstract] [Full Text] [Related]

  • 15. Metal ion stabilization of the U-turn of the A37 N6-dimethylallyl-modified anticodon stem-loop of Escherichia coli tRNAPhe.
    Cabello-Villegas J, Tworowska I, Nikonowicz EP.
    Biochemistry; 2004 Jan 13; 43(1):55-66. PubMed ID: 14705931
    [Abstract] [Full Text] [Related]

  • 16. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 17. 3-Amino-2-piperidinone-6-carboxylic acid. Molecular structures of cis and trans benzoyl derivatives.
    Li JP, Yellin TO, Debrosse CW, Eggleston DS.
    Int J Pept Protein Res; 1989 Oct 21; 34(4):311-8. PubMed ID: 2599771
    [Abstract] [Full Text] [Related]

  • 18. Zeatin biosynthesis from N-(Delta-isopentenyl)adenine in Actinidia and other woody plants.
    Einset JW.
    Proc Natl Acad Sci U S A; 1986 Feb 21; 83(4):972-5. PubMed ID: 16593660
    [Abstract] [Full Text] [Related]

  • 19. Identification of 2-Methylthio-methylenethio-N6 -(cis-4-hydroxyisopentenyl)adenosine (msms2 io6 A37 ) as a Novel Modification at Adenosine 37 of tRNAs from Salmonella typhimurium.
    Libiad M, Douki T, Fontecave M, Atta M.
    Chembiochem; 2023 Mar 14; 24(6):e202300019. PubMed ID: 36640047
    [Abstract] [Full Text] [Related]

  • 20. Molecular topology of polycyclic aromatic carcinogens determines DNA adduct conformation: a link to tumorigenic activity.
    Lin CH, Huang X, Kolbanovskii A, Hingerty BE, Amin S, Broyde S, Geacintov NE, Patel DJ.
    J Mol Biol; 2001 Mar 09; 306(5):1059-80. PubMed ID: 11237618
    [Abstract] [Full Text] [Related]

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