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Journal Abstract Search

396 related items for PubMed ID: 11908083

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  • 3. Free energy landscapes of peptides by enhanced conformational sampling.
    Nakajima N, Higo J, Kidera A, Nakamura H.
    J Mol Biol; 2000 Feb 11; 296(1):197-216. PubMed ID: 10656827
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  • 4. Free energy perturbation study of water dimer dissociation kinetics.
    Ming Y, Lai G, Tong C, Wood RH, Doren DJ.
    J Chem Phys; 2004 Jul 08; 121(2):773-7. PubMed ID: 15260604
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  • 5. Ab initio protein structure prediction with force field parameters derived from water-phase quantum chemical calculation.
    Katagiri D, Fuji H, Neya S, Hoshino T.
    J Comput Chem; 2008 Sep 08; 29(12):1930-44. PubMed ID: 18366016
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  • 7. Comparison of a QM/MM force field and molecular mechanics force fields in simulations of alanine and glycine "dipeptides" (Ace-Ala-Nme and Ace-Gly-Nme) in water in relation to the problem of modeling the unfolded peptide backbone in solution.
    Hu H, Elstner M, Hermans J.
    Proteins; 2003 Feb 15; 50(3):451-63. PubMed ID: 12557187
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  • 11. Metadynamics as a tool for mapping the conformational and free-energy space of peptides--the alanine dipeptide case study.
    Vymetal J, Vondrásek J.
    J Phys Chem B; 2010 Apr 29; 114(16):5632-42. PubMed ID: 20361773
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  • 17. A new force field (ECEPP-05) for peptides, proteins, and organic molecules.
    Arnautova YA, Jagielska A, Scheraga HA.
    J Phys Chem B; 2006 Mar 16; 110(10):5025-44. PubMed ID: 16526746
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