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Journal Abstract Search
401 related items for PubMed ID: 11908088
1. Monte Carlo sampling algorithm for searching a scale-transformed energy space of polypeptides. Nakamura H. J Comput Chem; 2002 Mar; 23(4):511-6. PubMed ID: 11908088 [Abstract] [Full Text] [Related]
6. Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins. Abagyan R, Totrov M. J Mol Biol; 1994 Jan 21; 235(3):983-1002. PubMed ID: 8289329 [Abstract] [Full Text] [Related]
7. New developments of the electrostatically driven Monte Carlo method: test on the membrane-bound portion of melittin. Ripoll DR, Liwo A, Scheraga HA. Biopolymers; 1998 Aug 21; 46(2):117-26. PubMed ID: 9664845 [Abstract] [Full Text] [Related]
8. On the multiple-minima problem in the conformational analysis of polypeptides. IV. Application of the electrostatically driven Monte Carlo method to the 20-residue membrane-bound portion of melittin. Ripoll DR, Scheraga HA. Biopolymers; 1990 Aug 21; 30(1-2):165-76. PubMed ID: 2224048 [Abstract] [Full Text] [Related]
10. Conformational analysis of the 20-residue membrane-bound portion of melittin by conformational space annealing. Lee J, Scheraga HA, Rackovsky S. Biopolymers; 1998 Aug 21; 46(2):103-16. PubMed ID: 9664844 [Abstract] [Full Text] [Related]
11. Prediction of peptide conformation using a scale-transformed entropy sampling algorithm. Nakamura H. Comput Biol Chem; 2004 Feb 21; 28(1):61-6. PubMed ID: 15022644 [Abstract] [Full Text] [Related]
15. Conformational space exploration of Met- and Leu-enkephalin using the MOLS method, molecular dynamics, and Monte Carlo simulation--a comparative study. Ramya L, Gautham N. Biopolymers; 2012 Mar 21; 97(3):165-76. PubMed ID: 21953081 [Abstract] [Full Text] [Related]
19. Metadynamic sampling of the free-energy landscapes of proteins coupled with a Monte Carlo algorithm. Marini F, Camilloni C, Provasi D, Broglia RA, Tiana G. Gene; 2008 Oct 01; 422(1-2):37-40. PubMed ID: 18593595 [Abstract] [Full Text] [Related]