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Journal Abstract Search

291 related items for PubMed ID: 11913392

  • 1. Transition state docking: a probe for noncovalent catalysis in biological systems. Application to antibody-catalyzed ester hydrolysis.
    Tantillo DJ, Houk KN.
    J Comput Chem; 2002 Jan 15; 23(1):84-95. PubMed ID: 11913392
    [Abstract] [Full Text] [Related]

  • 2. A structural basis for transition-state stabilization in antibody-catalyzed hydrolysis: crystal structures of an abzyme at 1. 8 A resolution.
    Kristensen O, Vassylyev DG, Tanaka F, Morikawa K, Fujii I.
    J Mol Biol; 1998 Aug 21; 281(3):501-11. PubMed ID: 9698565
    [Abstract] [Full Text] [Related]

  • 3. Direct hydroxide attack is a plausible mechanism for amidase antibody 43C9.
    Chong LT, Bandyopadhyay P, Scanlan TS, Kuntz ID, Kollman PA.
    J Comput Chem; 2003 Sep 21; 24(12):1371-7. PubMed ID: 12868101
    [Abstract] [Full Text] [Related]

  • 4. Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis.
    Oda M, Ito N, Tsumuraya T, Suzuki K, Sakakura M, Fujii I.
    J Mol Biol; 2007 May 25; 369(1):198-209. PubMed ID: 17428500
    [Abstract] [Full Text] [Related]

  • 5. Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
    Thayer MM, Olender EH, Arvai AS, Koike CK, Canestrelli IL, Stewart JD, Benkovic SJ, Getzoff ED, Roberts VA.
    J Mol Biol; 1999 Aug 13; 291(2):329-45. PubMed ID: 10438624
    [Abstract] [Full Text] [Related]

  • 6. Antibody-catalyzed oxy-cope rearrangement: mechanism and origins of catalysis and stereoselectivity from DFT quantum mechanics and flexible docking.
    Black KA, Leach AG, Kalani MY, Houk KN.
    J Am Chem Soc; 2004 Aug 11; 126(31):9695-708. PubMed ID: 15291573
    [Abstract] [Full Text] [Related]

  • 7. Analysis of hapten binding and catalytic determinants in a family of catalytic antibodies.
    Ulrich HD, Schultz PG.
    J Mol Biol; 1998 Jan 09; 275(1):95-111. PubMed ID: 9451442
    [Abstract] [Full Text] [Related]

  • 8. Structural basis of the transition-state stabilization in antibody-catalyzed hydrolysis.
    Sakakura M, Takahashi H, Shimba N, Fujii I, Shimada I.
    J Mol Biol; 2007 Mar 16; 367(1):133-47. PubMed ID: 17239396
    [Abstract] [Full Text] [Related]

  • 9. Crystallographic and biochemical analysis of cocaine-degrading antibody 15A10.
    Larsen NA, de Prada P, Deng SX, Mittal A, Braskett M, Zhu X, Wilson IA, Landry DW.
    Biochemistry; 2004 Jun 29; 43(25):8067-76. PubMed ID: 15209502
    [Abstract] [Full Text] [Related]

  • 10. Experimental determination of the absolute enantioselectivity of an antibody-catalyzed Diels-Alder reaction and theoretical explorations of the origins of stereoselectivity.
    Cannizzaro CE, Ashley JA, Janda KD, Houk KN.
    J Am Chem Soc; 2003 Mar 05; 125(9):2489-506. PubMed ID: 12603137
    [Abstract] [Full Text] [Related]

  • 11. Structural basis for antibody catalysis of a disfavored ring closure reaction.
    Gruber K, Zhou B, Houk KN, Lerner RA, Shevlin CG, Wilson IA.
    Biochemistry; 1999 Jun 01; 38(22):7062-74. PubMed ID: 10353817
    [Abstract] [Full Text] [Related]

  • 12. Site-directed mutagenesis of active site contact residues in a hydrolytic abzyme: evidence for an essential histidine involved in transition state stabilization.
    Miyashita H, Hara T, Tanimura R, Fukuyama S, Cagnon C, Kohara A, Fujii I.
    J Mol Biol; 1997 Apr 18; 267(5):1247-57. PubMed ID: 9150409
    [Abstract] [Full Text] [Related]

  • 13. Theoretical investigation of the origins of catalysis of a retro-Diels-Alder reaction by antibody 10F11.
    Leach AG, Houk KN, Reymond JL.
    J Org Chem; 2004 May 28; 69(11):3683-92. PubMed ID: 15152997
    [Abstract] [Full Text] [Related]

  • 14. Catalysis on the coastline: theozyme, molecular dynamics, and free energy perturbation analysis of antibody 21D8 catalysis of the decarboxylation of 5-nitro-3-carboxybenzisoxazole.
    Ujaque G, Tantillo DJ, Hu Y, Houk KN, Hotta K, Hilvert D.
    J Comput Chem; 2003 Jan 15; 24(1):98-110. PubMed ID: 12483679
    [Abstract] [Full Text] [Related]

  • 15. Structural basis for a disfavored elimination reaction in catalytic antibody 1D4.
    Larsen NA, Heine A, Crane L, Cravatt BF, Lerner RA, Wilson IA.
    J Mol Biol; 2001 Nov 16; 314(1):93-102. PubMed ID: 11724535
    [Abstract] [Full Text] [Related]

  • 16. Crystal structure of a catalytic antibody with a serine protease active site.
    Zhou GW, Guo J, Huang W, Fletterick RJ, Scanlan TS.
    Science; 1994 Aug 19; 265(5175):1059-64. PubMed ID: 8066444
    [Abstract] [Full Text] [Related]

  • 17. Mechanistic analysis of the phosphonate transition-state analogue-derived catalytic and non-catalytic antibody.
    Nishi Y, Yamamoto N, Shimazaki K, Takahashi-Ando N, Kakinuma H, Jialin S, Ruzheinikov SN, Muranova TA, Rice DW, Kajihara Y.
    J Biochem; 2007 Oct 19; 142(4):421-33. PubMed ID: 17981825
    [Abstract] [Full Text] [Related]

  • 18. Crossreactivity, efficiency and catalytic specificity of an esterase-like antibody.
    Gigant B, Charbonnier JB, Eshhar Z, Green BS, Knossow M.
    J Mol Biol; 1998 Dec 04; 284(3):741-50. PubMed ID: 9826512
    [Abstract] [Full Text] [Related]

  • 19. Design of biomimetic catalysts by molecular imprinting in synthetic polymers: the role of transition state stabilization.
    Wulff G, Liu J.
    Acc Chem Res; 2012 Feb 21; 45(2):239-47. PubMed ID: 21967389
    [Abstract] [Full Text] [Related]

  • 20. Substrate-assisted antibody catalysis.
    Deng S, Bharat N, de Prada P, Landry DW.
    Org Biomol Chem; 2004 Feb 07; 2(3):288-90. PubMed ID: 14747854
    [Abstract] [Full Text] [Related]

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