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Journal Abstract Search

163 related items for PubMed ID: 11948354

  • 1. A 'periodic table' for protein structures.
    Taylor WR.
    Nature; 2002 Apr 11; 416(6881):657-60. PubMed ID: 11948354
    [Abstract] [Full Text] [Related]

  • 2. Statistical and molecular dynamics studies of buried waters in globular proteins.
    Park S, Saven JG.
    Proteins; 2005 Aug 15; 60(3):450-63. PubMed ID: 15937899
    [Abstract] [Full Text] [Related]

  • 3. New method for protein secondary structure assignment based on a simple topological descriptor.
    Taylor T, Rivera M, Wilson G, Vaisman II.
    Proteins; 2005 Aug 15; 60(3):513-24. PubMed ID: 15887224
    [Abstract] [Full Text] [Related]

  • 4. Defining linear segments in protein structure.
    Taylor WR.
    J Mol Biol; 2001 Jul 27; 310(5):1135-50. PubMed ID: 11502001
    [Abstract] [Full Text] [Related]

  • 5. The anatomy of protein beta-sheet topology.
    Zhang C, Kim SH.
    J Mol Biol; 2000 Jun 16; 299(4):1075-89. PubMed ID: 10843859
    [Abstract] [Full Text] [Related]

  • 6. Protein fold similarity estimated by a probabilistic approach based on C(alpha)-C(alpha) distance comparison.
    Carugo O, Pongor S.
    J Mol Biol; 2002 Jan 25; 315(4):887-98. PubMed ID: 11812155
    [Abstract] [Full Text] [Related]

  • 7. Understanding the role of the topology in protein folding by computational inverse folding experiments.
    Mucherino A, Costantini S, di Serafino D, D'Apuzzo M, Facchiano A, Colonna G.
    Comput Biol Chem; 2008 Aug 25; 32(4):233-9. PubMed ID: 18479970
    [Abstract] [Full Text] [Related]

  • 8. Automated discovery of structural signatures of protein fold and function.
    Turcotte M, Muggleton SH, Sternberg MJ.
    J Mol Biol; 2001 Feb 23; 306(3):591-605. PubMed ID: 11178916
    [Abstract] [Full Text] [Related]

  • 9. Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies.
    Inbar Y, Benyamini H, Nussinov R, Wolfson HJ.
    Phys Biol; 2005 Nov 09; 2(4):S156-65. PubMed ID: 16280621
    [Abstract] [Full Text] [Related]

  • 10. TOPS: an enhanced database of protein structural topology.
    Michalopoulos I, Torrance GM, Gilbert DR, Westhead DR.
    Nucleic Acids Res; 2004 Jan 01; 32(Database issue):D251-4. PubMed ID: 14681405
    [Abstract] [Full Text] [Related]

  • 11. A protein folding degree measure and its dependence on crystal packing, protein size, secondary structure, and domain structural class.
    Estrada E.
    J Chem Inf Comput Sci; 2004 Jan 01; 44(4):1238-50. PubMed ID: 15272831
    [Abstract] [Full Text] [Related]

  • 12. Characterization of the denaturation of human alpha-lactalbumin in urea by molecular dynamics simulations.
    Smith LJ, Jones RM, van Gunsteren WF.
    Proteins; 2005 Feb 01; 58(2):439-49. PubMed ID: 15558602
    [Abstract] [Full Text] [Related]

  • 13. Short hydrogen bonds in proteins.
    Rajagopal S, Vishveshwara S.
    FEBS J; 2005 Apr 01; 272(8):1819-32. PubMed ID: 15819878
    [Abstract] [Full Text] [Related]

  • 14. Protein conformational transitions coupled to binding in molecular recognition of unstructured proteins: deciphering the effect of intermolecular interactions on computational structure prediction of the p27Kip1 protein bound to the cyclin A-cyclin-dependent kinase 2 complex.
    Verkhivker GM.
    Proteins; 2005 Feb 15; 58(3):706-16. PubMed ID: 15609350
    [Abstract] [Full Text] [Related]

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  • 16. Protein structure prediction based on sequence similarity.
    Jaroszewski L.
    Methods Mol Biol; 2009 Feb 15; 569():129-56. PubMed ID: 19623489
    [Abstract] [Full Text] [Related]

  • 17. Evaluation of protein fold comparison servers.
    Novotny M, Madsen D, Kleywegt GJ.
    Proteins; 2004 Feb 01; 54(2):260-70. PubMed ID: 14696188
    [Abstract] [Full Text] [Related]

  • 18. Fold recognition and accurate sequence-structure alignment of sequences directing beta-sheet proteins.
    McDonnell AV, Menke M, Palmer N, King J, Cowen L, Berger B.
    Proteins; 2006 Jun 01; 63(4):976-85. PubMed ID: 16547930
    [Abstract] [Full Text] [Related]

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