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Journal Abstract Search
172 related items for PubMed ID: 12117796
1. CX, an algorithm that identifies protruding atoms in proteins. Pintar A, Carugo O, Pongor S. Bioinformatics; 2002 Jul; 18(7):980-4. PubMed ID: 12117796 [Abstract] [Full Text] [Related]
2. DPX: for the analysis of the protein core. Pintar A, Carugo O, Pongor S. Bioinformatics; 2003 Jan 22; 19(2):313-4. PubMed ID: 12538266 [Abstract] [Full Text] [Related]
3. CX, DPX and PRIDE: WWW servers for the analysis and comparison of protein 3D structures. Vlahovicek K, Pintar A, Parthasarathi L, Carugo O, Pongor S. Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W252-4. PubMed ID: 15980464 [Abstract] [Full Text] [Related]
4. CX, DPX, and PCW: Web Servers for the Visualization of Interior and Protruding Regions of Protein Structures in 3D and 1D. Ligeti B, Vera R, Juhász J, Pongor S. Methods Mol Biol; 2017 Jul 01; 1484():301-309. PubMed ID: 27787834 [Abstract] [Full Text] [Related]
5. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization. Nayarisseri A, Shardiwal RK, Yadav M, Kanungo N, Singh P, Shah P, Ahmed S. Interdiscip Sci; 2014 Dec 01; 6(4):279-84. PubMed ID: 25118648 [Abstract] [Full Text] [Related]
6. iPfam: visualization of protein-protein interactions in PDB at domain and amino acid resolutions. Finn RD, Marshall M, Bateman A. Bioinformatics; 2005 Feb 01; 21(3):410-2. PubMed ID: 15353450 [Abstract] [Full Text] [Related]
7. Biskit--a software platform for structural bioinformatics. Grünberg R, Nilges M, Leckner J. Bioinformatics; 2007 Mar 15; 23(6):769-70. PubMed ID: 17237072 [Abstract] [Full Text] [Related]
8. POCKET: a computer graphics method for identifying and displaying protein cavities and their surrounding amino acids. Levitt DG, Banaszak LJ. J Mol Graph; 1992 Dec 15; 10(4):229-34. PubMed ID: 1476996 [Abstract] [Full Text] [Related]
14. RASMOL AB - new functionalities in the program for structure analysis. Pikora M, Gieldon A. Acta Biochim Pol; 2015 May 01; 62(3):629-31. PubMed ID: 26317128 [Abstract] [Full Text] [Related]
15. FastContact: a free energy scoring tool for protein-protein complex structures. Champ PC, Camacho CJ. Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W556-60. PubMed ID: 17537824 [Abstract] [Full Text] [Related]
16. Efficient recognition of folds in protein 3D structures by the improved PRIDE algorithm. Gáspári Z, Vlahovicek K, Pongor S. Bioinformatics; 2005 Aug 01; 21(15):3322-3. PubMed ID: 15914542 [Abstract] [Full Text] [Related]
17. PSIbase: a database of Protein Structural Interactome map (PSIMAP). Gong S, Yoon G, Jang I, Bolser D, Dafas P, Schroeder M, Choi H, Cho Y, Han K, Lee S, Choi H, Lappe M, Holm L, Kim S, Oh D, Bhak J. Bioinformatics; 2005 May 15; 21(10):2541-3. PubMed ID: 15749693 [Abstract] [Full Text] [Related]
18. PDB Editor: a user-friendly Java-based Protein Data Bank file editor with a GUI. Lee J, Kim SH. Acta Crystallogr D Biol Crystallogr; 2009 Apr 15; 65(Pt 4):399-402. PubMed ID: 19307724 [Abstract] [Full Text] [Related]