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Journal Abstract Search

217 related items for PubMed ID: 12140334

  • 1. PRIMROSE: a computer program for generating and estimating the phylogenetic range of 16S rRNA oligonucleotide probes and primers in conjunction with the RDP-II database.
    Ashelford KE, Weightman AJ, Fry JC.
    Nucleic Acids Res; 2002 Aug 01; 30(15):3481-9. PubMed ID: 12140334
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  • 4. Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment.
    Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer KH.
    Microbiology (Reading); 1996 May 01; 142 ( Pt 5)():1097-1106. PubMed ID: 8704951
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  • 5. probeBase--an online resource for rRNA-targeted oligonucleotide probes: new features 2007.
    Loy A, Maixner F, Wagner M, Horn M.
    Nucleic Acids Res; 2007 Jan 01; 35(Database issue):D800-4. PubMed ID: 17099228
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  • 6. Identification of characteristic oligonucleotides in the bacterial 16S ribosomal RNA sequence dataset.
    Zhang Z, Willson RC, Fox GE.
    Bioinformatics; 2002 Feb 01; 18(2):244-50. PubMed ID: 11847072
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  • 7. 16S rRNA-targeted oligonucleotide probes for the in situ detection of members of the phylum Cytophaga-Flavobacterium-Bacteroides.
    Weller R, Glöckner FO, Amann R.
    Syst Appl Microbiol; 2000 Apr 01; 23(1):107-14. PubMed ID: 10879984
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  • 9. probeBase: an online resource for rRNA-targeted oligonucleotide probes.
    Loy A, Horn M, Wagner M.
    Nucleic Acids Res; 2003 Jan 01; 31(1):514-6. PubMed ID: 12520066
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  • 12. PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification.
    Jaziri F, Parisot N, Abid A, Denonfoux J, Ribière C, Gasc C, Boucher D, Brugère JF, Mahul A, Hill DR, Peyretaillade E, Peyret P.
    Database (Oxford); 2014 Jan 01; 2014(0):bau036. PubMed ID: 24771669
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  • 13. Tax4Fun: predicting functional profiles from metagenomic 16S rRNA data.
    Aßhauer KP, Wemheuer B, Daniel R, Meinicke P.
    Bioinformatics; 2015 Sep 01; 31(17):2882-4. PubMed ID: 25957349
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  • 15. Phylogenetic characterization and in situ detection of a Cytophaga-Flexibacter-Bacteroides phylogroup bacterium in Tuber borchii vittad. Ectomycorrhizal mycelium.
    Barbieri E, Potenza L, Rossi I, Sisti D, Giomaro G, Rossetti S, Beimfohr C, Stocchi V.
    Appl Environ Microbiol; 2000 Nov 01; 66(11):5035-42. PubMed ID: 11055961
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  • 17. Group-specific PCR primers for the phylum Acidobacteria designed based on the comparative analysis of 16S rRNA gene sequences.
    Lee SH, Cho JC.
    J Microbiol Methods; 2011 Aug 01; 86(2):195-203. PubMed ID: 21600936
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  • 18. A Bayesian taxonomic classification method for 16S rRNA gene sequences with improved species-level accuracy.
    Gao X, Lin H, Revanna K, Dong Q.
    BMC Bioinformatics; 2017 May 10; 18(1):247. PubMed ID: 28486927
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