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395 related items for PubMed ID: 12354070

  • 1. Molecular dynamics simulations of a calmodulin-peptide complex in solution.
    Yang C, Kuczera K.
    J Biomol Struct Dyn; 2002 Oct; 20(2):179-97. PubMed ID: 12354070
    [Abstract] [Full Text] [Related]

  • 2. Structure, dynamics and interaction with kinase targets: computer simulations of calmodulin.
    Yang C, Jas GS, Kuczera K.
    Biochim Biophys Acta; 2004 Mar 11; 1697(1-2):289-300. PubMed ID: 15023369
    [Abstract] [Full Text] [Related]

  • 3. Interactions of calmodulin with death-associated protein kinase peptides: experimental and modeling studies.
    Kuczera K, Kursula P.
    J Biomol Struct Dyn; 2012 Mar 11; 30(1):45-61. PubMed ID: 22571432
    [Abstract] [Full Text] [Related]

  • 4. Investigating the high affinity and low sequence specificity of calmodulin binding to its targets.
    Afshar M, Caves LS, Guimard L, Hubbard RE, Calas B, Grassy G, Haiech J.
    J Mol Biol; 1994 Dec 16; 244(5):554-71. PubMed ID: 7990140
    [Abstract] [Full Text] [Related]

  • 5. Energetics of target peptide recognition by calmodulin: a calorimetric study.
    Wintrode PL, Privalov PL.
    J Mol Biol; 1997 Mar 14; 266(5):1050-62. PubMed ID: 9086281
    [Abstract] [Full Text] [Related]

  • 6. Free-energy simulations of the oxidation of c-terminal methionines in calmodulin.
    Jas GS, Kuczera K.
    Proteins; 2002 Aug 01; 48(2):257-68. PubMed ID: 12112694
    [Abstract] [Full Text] [Related]

  • 7. Structure and dynamics of calcium-activated calmodulin in solution.
    Yang C, Jas GS, Kuczera K.
    J Biomol Struct Dyn; 2001 Oct 01; 19(2):247-71. PubMed ID: 11697730
    [Abstract] [Full Text] [Related]

  • 8. Effects of CMAP and electrostatic cutoffs on the dynamics of an integral membrane protein: the phospholamban study.
    Houndonougbo Y, Kuczera K, Jas GS.
    J Biomol Struct Dyn; 2008 Aug 01; 26(1):17-34. PubMed ID: 18533723
    [Abstract] [Full Text] [Related]

  • 9. Dynamics and entropy of a calmodulin-peptide complex studied by NMR and molecular dynamics.
    Prabhu NV, Lee AL, Wand AJ, Sharp KA.
    Biochemistry; 2003 Jan 21; 42(2):562-70. PubMed ID: 12525185
    [Abstract] [Full Text] [Related]

  • 10. Molecular dynamics simulations of calcium-free calmodulin in solution.
    Yang C, Kuczera K.
    J Biomol Struct Dyn; 2002 Apr 21; 19(5):801-19. PubMed ID: 11922837
    [Abstract] [Full Text] [Related]

  • 11. Molecular dynamics study of water penetration in staphylococcal nuclease.
    Damjanović A, García-Moreno B, Lattman EE, García AE.
    Proteins; 2005 Aug 15; 60(3):433-49. PubMed ID: 15971206
    [Abstract] [Full Text] [Related]

  • 12. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA, Mehler EL, Zhang D, Weinstein H.
    Proteins; 2003 Apr 01; 51(1):109-25. PubMed ID: 12596268
    [Abstract] [Full Text] [Related]

  • 13. Tryptophan fluorescence quenching by methionine and selenomethionine residues of calmodulin: orientation of peptide and protein binding.
    Yuan T, Weljie AM, Vogel HJ.
    Biochemistry; 1998 Mar 03; 37(9):3187-95. PubMed ID: 9485473
    [Abstract] [Full Text] [Related]

  • 14. Characterization of the backbone and side chain dynamics of the CaM-CaMKIp complex reveals microscopic contributions to protein conformational entropy.
    Frederick KK, Kranz JK, Wand AJ.
    Biochemistry; 2006 Aug 15; 45(32):9841-8. PubMed ID: 16893184
    [Abstract] [Full Text] [Related]

  • 15. Variable conformation and dynamics of calmodulin complexed with peptides derived from the autoinhibitory domains of target proteins.
    Yao Y, Squier TC.
    Biochemistry; 1996 May 28; 35(21):6815-27. PubMed ID: 8639633
    [Abstract] [Full Text] [Related]

  • 16. Solution X-ray scattering reveals a novel structure of calmodulin complexed with a binding domain peptide from the HIV-1 matrix protein p17.
    Izumi Y, Watanabe H, Watanabe N, Aoyama A, Jinbo Y, Hayashi N.
    Biochemistry; 2008 Jul 08; 47(27):7158-66. PubMed ID: 18553937
    [Abstract] [Full Text] [Related]

  • 17. Molecular dynamics study of a calmodulin-like protein with an IQ peptide: spontaneous refolding of the protein around the peptide.
    Ganoth A, Nachliel E, Friedman R, Gutman M.
    Proteins; 2006 Jul 01; 64(1):133-46. PubMed ID: 16568447
    [Abstract] [Full Text] [Related]

  • 18. Salt enhances calmodulin-target interaction.
    André I, Kesvatera T, Jönsson B, Linse S.
    Biophys J; 2006 Apr 15; 90(8):2903-10. PubMed ID: 16428276
    [Abstract] [Full Text] [Related]

  • 19. Kinase recognition by calmodulin: modeling the interaction with the autoinhibitory region of human cardiac titin kinase.
    Amodeo P, Castiglione Morelli MA, Strazzullo G, Fucile P, Gautel M, Motta A.
    J Mol Biol; 2001 Feb 09; 306(1):81-95. PubMed ID: 11178895
    [Abstract] [Full Text] [Related]

  • 20. Redistribution and loss of side chain entropy upon formation of a calmodulin-peptide complex.
    Lee AL, Kinnear SA, Wand AJ.
    Nat Struct Biol; 2000 Jan 09; 7(1):72-7. PubMed ID: 10625431
    [Abstract] [Full Text] [Related]

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