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Journal Abstract Search

180 related items for PubMed ID: 12419224

  • 1. Universally conserved interactions between the ribosome and the anticodon stem-loop of A site tRNA important for translocation.
    Phelps SS, Jerinic O, Joseph S.
    Mol Cell; 2002 Oct; 10(4):799-807. PubMed ID: 12419224
    [Abstract] [Full Text] [Related]

  • 2. Identification of 2'-hydroxyl groups required for interaction of a tRNA anticodon stem-loop region with the ribosome.
    von Ahsen U, Green R, Schroeder R, Noller HF.
    RNA; 1997 Jan; 3(1):49-56. PubMed ID: 8990398
    [Abstract] [Full Text] [Related]

  • 3. Translocation of a tRNA with an extended anticodon through the ribosome.
    Phelps SS, Gaudin C, Yoshizawa S, Benitez C, Fourmy D, Joseph S.
    J Mol Biol; 2006 Jul 14; 360(3):610-22. PubMed ID: 16787653
    [Abstract] [Full Text] [Related]

  • 4. Photolabile anticodon stem-loop analogs of tRNAPhe as probes of ribosomal structure and structural fluctuation at the decoding center.
    Druzina Z, Cooperman BS.
    RNA; 2004 Oct 14; 10(10):1550-62. PubMed ID: 15337844
    [Abstract] [Full Text] [Related]

  • 5. Selective perturbation of G530 of 16 S rRNA by translational miscoding agents and a streptomycin-dependence mutation in protein S12.
    Powers T, Noller HF.
    J Mol Biol; 1994 Jan 07; 235(1):156-72. PubMed ID: 8289238
    [Abstract] [Full Text] [Related]

  • 6. Non-bridging phosphate oxygen atoms within the tRNA anticodon stem-loop are essential for ribosomal A site binding and translocation.
    Phelps SS, Joseph S.
    J Mol Biol; 2005 Jun 03; 349(2):288-301. PubMed ID: 15890196
    [Abstract] [Full Text] [Related]

  • 7. Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe).
    Cabello-Villegas J, Winkler ME, Nikonowicz EP.
    J Mol Biol; 2002 Jun 21; 319(5):1015-34. PubMed ID: 12079344
    [Abstract] [Full Text] [Related]

  • 8. Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains.
    Ashraf SS, Guenther R, Agris PF.
    RNA; 1999 Sep 21; 5(9):1191-9. PubMed ID: 10496220
    [Abstract] [Full Text] [Related]

  • 9. A new understanding of the decoding principle on the ribosome.
    Demeshkina N, Jenner L, Westhof E, Yusupov M, Yusupova G.
    Nature; 2012 Mar 21; 484(7393):256-9. PubMed ID: 22437501
    [Abstract] [Full Text] [Related]

  • 10. Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactions.
    Konevega AL, Soboleva NG, Makhno VI, Semenkov YP, Wintermeyer W, Rodnina MV, Katunin VI.
    RNA; 2004 Jan 21; 10(1):90-101. PubMed ID: 14681588
    [Abstract] [Full Text] [Related]

  • 11. Recognition of the codon-anticodon helix by ribosomal RNA.
    Yoshizawa S, Fourmy D, Puglisi JD.
    Science; 1999 Sep 10; 285(5434):1722-5. PubMed ID: 10481006
    [Abstract] [Full Text] [Related]

  • 12. EF-G-catalyzed translocation of anticodon stem-loop analogs of transfer RNA in the ribosome.
    Joseph S, Noller HF.
    EMBO J; 1998 Jun 15; 17(12):3478-83. PubMed ID: 9628883
    [Abstract] [Full Text] [Related]

  • 13. Steric complementarity in the decoding center is important for tRNA selection by the ribosome.
    Khade PK, Shi X, Joseph S.
    J Mol Biol; 2013 Oct 23; 425(20):3778-89. PubMed ID: 23542008
    [Abstract] [Full Text] [Related]

  • 14. Posttranscriptional modifications at the 37th position in the anticodon stem-loop of tRNA: structural insights from MD simulations.
    Seelam Prabhakar P, Takyi NA, Wetmore SD.
    RNA; 2021 Feb 23; 27(2):202-220. PubMed ID: 33214333
    [Abstract] [Full Text] [Related]

  • 15. Recognition of cognate transfer RNA by the 30S ribosomal subunit.
    Ogle JM, Brodersen DE, Clemons WM, Tarry MJ, Carter AP, Ramakrishnan V.
    Science; 2001 May 04; 292(5518):897-902. PubMed ID: 11340196
    [Abstract] [Full Text] [Related]

  • 16. Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".
    Dao V, Guenther R, Malkiewicz A, Nawrot B, Sochacka E, Kraszewski A, Jankowska J, Everett K, Agris PF.
    Proc Natl Acad Sci U S A; 1994 Mar 15; 91(6):2125-9. PubMed ID: 7510886
    [Abstract] [Full Text] [Related]

  • 17. Interaction of ribo- and deoxyriboanalogs of yeast tRNA(Phe) anticodon arm with programmed small ribosomal subunits of Escherichia coli and rabbit liver.
    Koval'chuke OV, Potapov AP, El'skaya AV, Potapov VK, Krinetskaya NF, Dolinnaya NG, Shabarova ZA.
    Nucleic Acids Res; 1991 Aug 11; 19(15):4199-201. PubMed ID: 1870974
    [Abstract] [Full Text] [Related]

  • 18. Periodic conformational changes in rRNA: monitoring the dynamics of translating ribosomes.
    Polacek N, Patzke S, Nierhaus KH, Barta A.
    Mol Cell; 2000 Jul 11; 6(1):159-71. PubMed ID: 10949037
    [Abstract] [Full Text] [Related]

  • 19. Rapid kinetic analysis of EF-G-dependent mRNA translocation in the ribosome.
    Studer SM, Feinberg JS, Joseph S.
    J Mol Biol; 2003 Mar 21; 327(2):369-81. PubMed ID: 12628244
    [Abstract] [Full Text] [Related]

  • 20. Structures of the ribosome in intermediate states of ratcheting.
    Zhang W, Dunkle JA, Cate JH.
    Science; 2009 Aug 21; 325(5943):1014-7. PubMed ID: 19696352
    [Abstract] [Full Text] [Related]

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