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Journal Abstract Search

357 related items for PubMed ID: 12471606

  • 1. Analysis of the binding energies of testosterone, 5alpha-dihydrotestosterone, androstenedione and dehydroepiandrosterone sulfate with an antitestosterone antibody.
    Nordman N, Valjakka J, Peräkylä M.
    Proteins; 2003 Jan 01; 50(1):135-43. PubMed ID: 12471606
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  • 2. Free energy simulations and MM-PBSA analyses on the affinity and specificity of steroid binding to antiestradiol antibody.
    Laitinen T, Kankare JA, Peräkylä M.
    Proteins; 2004 Apr 01; 55(1):34-43. PubMed ID: 14997538
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  • 3. Absolute and relative binding free energy calculations of the interaction of biotin and its analogs with streptavidin using molecular dynamics/free energy perturbation approaches.
    Miyamoto S, Kollman PA.
    Proteins; 1993 Jul 01; 16(3):226-45. PubMed ID: 8346190
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  • 4. Binding free energies and free energy components from molecular dynamics and Poisson-Boltzmann calculations. Application to amino acid recognition by aspartyl-tRNA synthetase.
    Archontis G, Simonson T, Karplus M.
    J Mol Biol; 2001 Feb 16; 306(2):307-27. PubMed ID: 11237602
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  • 5. Dissection of binding interactions in the complex between the anti-lysozyme antibody HyHEL-63 and its antigen.
    Li Y, Urrutia M, Smith-Gill SJ, Mariuzza RA.
    Biochemistry; 2003 Jan 14; 42(1):11-22. PubMed ID: 12515535
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  • 6. Glycogen phosphorylase inhibitors: a free energy perturbation analysis of glucopyranose spirohydantoin analogues.
    Archontis G, Watson KA, Xie Q, Andreou G, Chrysina ED, Zographos SE, Oikonomakos NG, Karplus M.
    Proteins; 2005 Dec 01; 61(4):984-98. PubMed ID: 16245298
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  • 11. Binding of antifusion peptides with HIVgp41 from molecular dynamics simulations: quantitative correlation with experiment.
    Strockbine B, Rizzo RC.
    Proteins; 2007 May 15; 67(3):630-42. PubMed ID: 17335007
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  • 12. Analysis of binding interactions in an idiotope-antiidiotope protein-protein complex by double mutant cycles.
    Goldman ER, Dall'Acqua W, Braden BC, Mariuzza RA.
    Biochemistry; 1997 Jan 07; 36(1):49-56. PubMed ID: 8993317
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  • 13. Prediction of ligand binding affinity and orientation of xenoestrogens to the estrogen receptor by molecular dynamics simulations and the linear interaction energy method.
    van Lipzig MM, ter Laak AM, Jongejan A, Vermeulen NP, Wamelink M, Geerke D, Meerman JH.
    J Med Chem; 2004 Feb 12; 47(4):1018-30. PubMed ID: 14761204
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  • 14. Theoretical calculation of the binding free energies for pyruvate dehydrogenase E1 binding with ligands.
    Xiong Y, Li Y, He H, Zhan CG.
    Bioorg Med Chem Lett; 2007 Sep 15; 17(18):5186-90. PubMed ID: 17644334
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  • 20. Fine tuning of an anti-testosterone antibody binding site by stepwise optimisation of the CDRs.
    Hemminki A, Niemi S, Hautoniemi L, Söderlund H, Takkinen K.
    Immunotechnology; 1998 Jun 15; 4(1):59-69. PubMed ID: 9661815
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