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160 related items for PubMed ID: 12527771

  • 1. Binding interactions between the core central domain of 16S rRNA and the ribosomal protein S15 determined by molecular dynamics simulations.
    Li W, Ma B, Shapiro BA.
    Nucleic Acids Res; 2003 Jan 15; 31(2):629-38. PubMed ID: 12527771
    [Abstract] [Full Text] [Related]

  • 2. The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: comparison with Escherichia coli S15, minimum site and structure.
    Serganov AA, Masquida B, Westhof E, Cachia C, Portier C, Garber M, Ehresmann B, Ehresmann C.
    RNA; 1996 Nov 15; 2(11):1124-38. PubMed ID: 8903343
    [Abstract] [Full Text] [Related]

  • 3. Assembly of the central domain of the 30S ribosomal subunit: roles for the primary binding ribosomal proteins S15 and S8.
    Jagannathan I, Culver GM.
    J Mol Biol; 2003 Jul 04; 330(2):373-83. PubMed ID: 12823975
    [Abstract] [Full Text] [Related]

  • 4. Molecular dynamics simulations of the denaturation and refolding of an RNA tetraloop.
    Li W, Ma B, Shapiro B.
    J Biomol Struct Dyn; 2001 Dec 04; 19(3):381-96. PubMed ID: 11790138
    [Abstract] [Full Text] [Related]

  • 5. Crystal structure of the S15-rRNA complex.
    Nikulin A, Serganov A, Ennifar E, Tishchenko S, Nevskaya N, Shepard W, Portier C, Garber M, Ehresmann B, Ehresmann C, Nikonov S, Dumas P.
    Nat Struct Biol; 2000 Apr 04; 7(4):273-7. PubMed ID: 10742169
    [Abstract] [Full Text] [Related]

  • 6. Role of N-terminal helix in interaction of ribosomal protein S15 with 16S rRNA.
    Revtovich SV, Nikulin AD, Nikonov SV.
    Biochemistry (Mosc); 2004 Dec 04; 69(12):1319-23. PubMed ID: 15627386
    [Abstract] [Full Text] [Related]

  • 7. Role of conserved nucleotides in building the 16 S rRNA binding site for ribosomal protein S15.
    Serganov A, Bénard L, Portier C, Ennifar E, Garber M, Ehresmann B, Ehresmann C.
    J Mol Biol; 2001 Jan 26; 305(4):785-803. PubMed ID: 11162092
    [Abstract] [Full Text] [Related]

  • 8. Ribosomal protein S15 from Thermus thermophilus--cloning, sequencing, overexpression of the gene and RNA-binding properties of the protein.
    Serganov A, Rak A, Garber M, Reinbolt J, Ehresmann B, Ehresmann C, Grunberg-Manago M, Portier C.
    Eur J Biochem; 1997 Jun 01; 246(2):291-300. PubMed ID: 9208917
    [Abstract] [Full Text] [Related]

  • 9. Specific recognition of rpsO mRNA and 16S rRNA by Escherichia coli ribosomal protein S15 relies on both mimicry and site differentiation.
    Mathy N, Pellegrini O, Serganov A, Patel DJ, Ehresmann C, Portier C.
    Mol Microbiol; 2004 May 01; 52(3):661-75. PubMed ID: 15101974
    [Abstract] [Full Text] [Related]

  • 10. Central domain assembly: thermodynamics and kinetics of S6 and S18 binding to an S15-RNA complex.
    Recht MI, Williamson JR.
    J Mol Biol; 2001 Oct 12; 313(1):35-48. PubMed ID: 11601845
    [Abstract] [Full Text] [Related]

  • 11. Conformational variability of the N-terminal helix in the structure of ribosomal protein S15.
    Clemons WM, Davies C, White SW, Ramakrishnan V.
    Structure; 1998 Apr 15; 6(4):429-38. PubMed ID: 9562554
    [Abstract] [Full Text] [Related]

  • 12. The E. coli 16S rRNA binding site of ribosomal protein S15: higher-order structure in the absence and in the presence of the protein.
    Mougel M, Philippe C, Ebel JP, Ehresmann B, Ehresmann C.
    Nucleic Acids Res; 1988 Apr 11; 16(7):2825-39. PubMed ID: 2453025
    [Abstract] [Full Text] [Related]

  • 13. The conformational landscape of the ribosomal protein S15 and its influence on the protein interaction with 16S RNA.
    Créty T, Malliavin TE.
    Biophys J; 2007 Apr 15; 92(8):2647-65. PubMed ID: 17259282
    [Abstract] [Full Text] [Related]

  • 14. Ribosomal protein-dependent orientation of the 16 S rRNA environment of S15.
    Jagannathan I, Culver GM.
    J Mol Biol; 2004 Jan 30; 335(5):1173-85. PubMed ID: 14729335
    [Abstract] [Full Text] [Related]

  • 15. Effects of polyvalent cations on the folding of an rRNA three-way junction and binding of ribosomal protein S15.
    Batey RT, Williamson JR.
    RNA; 1998 Aug 30; 4(8):984-97. PubMed ID: 9701289
    [Abstract] [Full Text] [Related]

  • 16. Ribosomal protein S15 represses its own translation via adaptation of an rRNA-like fold within its mRNA.
    Serganov A, Polonskaia A, Ehresmann B, Ehresmann C, Patel DJ.
    EMBO J; 2003 Apr 15; 22(8):1898-908. PubMed ID: 12682022
    [Abstract] [Full Text] [Related]

  • 17. Binding of helix-threading peptides to E. coli 16S ribosomal RNA and inhibition of the S15-16S complex.
    Gooch BD, Krishnamurthy M, Shadid M, Beal PA.
    Chembiochem; 2005 Dec 15; 6(12):2247-54. PubMed ID: 16245373
    [Abstract] [Full Text] [Related]

  • 18. Structure of the S15,S6,S18-rRNA complex: assembly of the 30S ribosome central domain.
    Agalarov SC, Sridhar Prasad G, Funke PM, Stout CD, Williamson JR.
    Science; 2000 Apr 07; 288(5463):107-13. PubMed ID: 10753109
    [Abstract] [Full Text] [Related]

  • 19. Structure, dynamics, and elasticity of free 16s rRNA helix 44 studied by molecular dynamics simulations.
    Réblová K, Lankas F, Rázga F, Krasovska MV, Koca J, Sponer J.
    Biopolymers; 2006 Aug 05; 82(5):504-20. PubMed ID: 16538608
    [Abstract] [Full Text] [Related]

  • 20. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: II. Specificity determinants of RNA-protein recognition.
    Batey RT, Williamson JR.
    J Mol Biol; 1996 Aug 30; 261(4):550-67. PubMed ID: 8794876
    [Abstract] [Full Text] [Related]

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