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515 related items for PubMed ID: 12731867

  • 1. Stem of SL1 RNA in HIV-1: structure and nucleocapsid protein binding for a 1 x 3 internal loop.
    Yuan Y, Kerwood DJ, Paoletti AC, Shubsda MF, Borer PN.
    Biochemistry; 2003 May 13; 42(18):5259-69. PubMed ID: 12731867
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  • 2. NMR structure of the HIV-1 nucleocapsid protein bound to stem-loop SL2 of the psi-RNA packaging signal. Implications for genome recognition.
    Amarasinghe GK, De Guzman RN, Turner RB, Chancellor KJ, Wu ZR, Summers MF.
    J Mol Biol; 2000 Aug 11; 301(2):491-511. PubMed ID: 10926523
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  • 3. The major HIV-1 packaging signal is an extended bulged stem loop whose structure is altered on interaction with the Gag polyprotein.
    Zeffman A, Hassard S, Varani G, Lever A.
    J Mol Biol; 2000 Apr 07; 297(4):877-93. PubMed ID: 10736224
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  • 4. HIV-1 nucleocapsid protein as a nucleic acid chaperone: spectroscopic study of its helix-destabilizing properties, structural binding specificity, and annealing activity.
    Urbaneja MA, Wu M, Casas-Finet JR, Karpel RL.
    J Mol Biol; 2002 May 03; 318(3):749-64. PubMed ID: 12054820
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  • 5. HIV-1 nucleocapsid protein activates transient melting of least stable parts of the secondary structure of TAR and its complementary sequence.
    Bernacchi S, Stoylov S, Piémont E, Ficheux D, Roques BP, Darlix JL, Mély Y.
    J Mol Biol; 2002 Mar 29; 317(3):385-99. PubMed ID: 11922672
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  • 6. Stem-loop SL4 of the HIV-1 psi RNA packaging signal exhibits weak affinity for the nucleocapsid protein. structural studies and implications for genome recognition.
    Amarasinghe GK, Zhou J, Miskimon M, Chancellor KJ, McDonald JA, Matthews AG, Miller RR, Rouse MD, Summers MF.
    J Mol Biol; 2001 Dec 14; 314(5):961-70. PubMed ID: 11743714
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  • 7. Insight into the intrinsic flexibility of the SL1 stem-loop from genomic RNA of HIV-1 as probed by molecular dynamics simulation.
    Mazier S, Genest D.
    Biopolymers; 2008 Mar 14; 89(3):187-96. PubMed ID: 18008323
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  • 8. HIV-1(Lai) genomic RNA: combined used of NMR and molecular dynamics simulation for studying the structure and internal dynamics of a mutated SL1 hairpin.
    Kieken F, Arnoult E, Barbault F, Paquet F, Huynh-Dinh T, Paoletti J, Genest D, Lancelot G.
    Eur Biophys J; 2002 Dec 14; 31(7):521-31. PubMed ID: 12451421
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  • 9. Nucleocapsid protein-mediated maturation of dimer initiation complex of full-length SL1 stemloop of HIV-1: sequence effects and mechanism of RNA refolding.
    Mujeeb A, Ulyanov NB, Georgantis S, Smirnov I, Chung J, Parslow TG, James TL.
    Nucleic Acids Res; 2007 Dec 14; 35(6):2026-34. PubMed ID: 17341460
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  • 12. Heteronuclear NMR studies of the interaction of tRNA(Lys)3 with HIV-1 nucleocapsid protein.
    Tisné C, Roques BP, Dardel F.
    J Mol Biol; 2001 Feb 23; 306(3):443-54. PubMed ID: 11178904
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  • 13. Role of distal zinc finger of nucleocapsid protein in genomic RNA dimerization of human immunodeficiency virus type 1; no role for the palindrome crowning the R-U5 hairpin.
    Laughrea M, Shen N, Jetté L, Darlix JL, Kleiman L, Wainberg MA.
    Virology; 2001 Mar 01; 281(1):109-16. PubMed ID: 11222101
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  • 14. Identification of a high affinity nucleocapsid protein binding element within the Moloney murine leukemia virus Psi-RNA packaging signal: implications for genome recognition.
    D'Souza V, Melamed J, Habib D, Pullen K, Wallace K, Summers MF.
    J Mol Biol; 2001 Nov 23; 314(2):217-32. PubMed ID: 11718556
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  • 16. A specific RNA structural motif mediates high affinity binding by the HIV-1 nucleocapsid protein (NCp7).
    Allen P, Collins B, Brown D, Hostomsky Z, Gold L.
    Virology; 1996 Nov 15; 225(2):306-15. PubMed ID: 8918917
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  • 17. NMR structure of the (52-96) C-terminal domain of the HIV-1 regulatory protein Vpr: molecular insights into its biological functions.
    Schüler W, Wecker K, de Rocquigny H, Baudat Y, Sire J, Roques BP.
    J Mol Biol; 1999 Feb 05; 285(5):2105-17. PubMed ID: 9925788
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  • 19. Specific interactions between HIV-1 nucleocapsid protein and the TAR element.
    Kanevsky I, Chaminade F, Ficheux D, Moumen A, Gorelick R, Negroni M, Darlix JL, Fossé P.
    J Mol Biol; 2005 May 20; 348(5):1059-77. PubMed ID: 15854644
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  • 20. Structure of the complex between the HIV-1 nucleocapsid protein NCp7 and the single-stranded pentanucleotide d(ACGCC).
    Morellet N, Déméné H, Teilleux V, Huynh-Dinh T, de Rocquigny H, Fournié-Zaluski MC, Roques BP.
    J Mol Biol; 1998 Oct 23; 283(2):419-34. PubMed ID: 9769215
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