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Journal Abstract Search

259 related items for PubMed ID: 13129354

  • 1. A novel RNA motif based on the structure of unusually stable 2',5'-linked r(UUCG) loops.
    Denisov AY, Hannoush RN, Gehring K, Damha MJ.
    J Am Chem Soc; 2003 Sep 24; 125(38):11525-31. PubMed ID: 13129354
    [Abstract] [Full Text] [Related]

  • 2. Structure of 2',5'-linked tetraribonucleotide loops: a novel RNA motif.
    Hannoush RN, Denisov AY, Gehring K, Damha MJ.
    Nucleosides Nucleotides Nucleic Acids; 2003 Sep 24; 22(5-8):1687-90. PubMed ID: 14565496
    [Abstract] [Full Text] [Related]

  • 3. Preference for ribose over deoxyribose in loop-closing base pairs of extra stable nucleic acid hairpins.
    Hannoush RN, Damha MJ.
    Nucleosides Nucleotides Nucleic Acids; 2005 Sep 24; 24(10-12):1519-30. PubMed ID: 16438032
    [Abstract] [Full Text] [Related]

  • 4. Experimental and computational studies of the G[UUCG]C RNA tetraloop.
    Williams DJ, Hall KB.
    J Mol Biol; 2000 Apr 14; 297(5):1045-61. PubMed ID: 10764572
    [Abstract] [Full Text] [Related]

  • 5. Remarkable stability of hairpins containing 2',5'-linked RNA loops.
    Hannoush RN, Damha MJ.
    J Am Chem Soc; 2001 Dec 12; 123(49):12368-74. PubMed ID: 11734039
    [Abstract] [Full Text] [Related]

  • 6. A network of heterogeneous hydrogen bonds in GNRA tetraloops.
    Jucker FM, Heus HA, Yip PF, Moors EH, Pardi A.
    J Mol Biol; 1996 Dec 20; 264(5):968-80. PubMed ID: 9000624
    [Abstract] [Full Text] [Related]

  • 7. Structure of the P1 helix from group I self-splicing introns.
    Allain FH, Varani G.
    J Mol Biol; 1995 Jul 14; 250(3):333-53. PubMed ID: 7608979
    [Abstract] [Full Text] [Related]

  • 8. A DNA hairpin with a single residue loop closed by a strongly distorted Watson-Crick G x C base-pair.
    El Amri C, Mauffret O, Monnot M, Tevanian G, Lescot E, Porumb H, Fermandjian S.
    J Mol Biol; 1999 Nov 26; 294(2):427-42. PubMed ID: 10610769
    [Abstract] [Full Text] [Related]

  • 9. Portability of the GN(R)A hairpin loop motif between RNA and DNA.
    Blose JM, Lloyd KP, Bevilacqua PC.
    Biochemistry; 2009 Sep 22; 48(37):8787-94. PubMed ID: 19681609
    [Abstract] [Full Text] [Related]

  • 10. NMR structure of stem-loop SL2 of the HIV-1 psi RNA packaging signal reveals a novel A-U-A base-triple platform.
    Amarasinghe GK, De Guzman RN, Turner RB, Summers MF.
    J Mol Biol; 2000 May 26; 299(1):145-56. PubMed ID: 10860728
    [Abstract] [Full Text] [Related]

  • 11. Stability of RNA hairpins closed by wobble base pairs.
    Giese MR, Betschart K, Dale T, Riley CK, Rowan C, Sprouse KJ, Serra MJ.
    Biochemistry; 1998 Jan 27; 37(4):1094-100. PubMed ID: 9454601
    [Abstract] [Full Text] [Related]

  • 12. Structural features of a six-nucleotide RNA hairpin loop found in ribosomal RNA.
    Fountain MA, Serra MJ, Krugh TR, Turner DH.
    Biochemistry; 1996 May 28; 35(21):6539-48. PubMed ID: 8639602
    [Abstract] [Full Text] [Related]

  • 13. Evidence that folding of an RNA tetraloop hairpin is less cooperative than its DNA counterpart.
    Moody EM, Feerrar JC, Bevilacqua PC.
    Biochemistry; 2004 Jun 29; 43(25):7992-8. PubMed ID: 15209494
    [Abstract] [Full Text] [Related]

  • 14. The crystal structure of UUCG tetraloop.
    Ennifar E, Nikulin A, Tishchenko S, Serganov A, Nevskaya N, Garber M, Ehresmann B, Ehresmann C, Nikonov S, Dumas P.
    J Mol Biol; 2000 Nov 17; 304(1):35-42. PubMed ID: 11071808
    [Abstract] [Full Text] [Related]

  • 15. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
    Vecenie CJ, Morrow CV, Zyra A, Serra MJ.
    Biochemistry; 2006 Feb 07; 45(5):1400-7. PubMed ID: 16445282
    [Abstract] [Full Text] [Related]

  • 16. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.
    Pley HW, Flaherty KM, McKay DB.
    Nature; 1994 Nov 03; 372(6501):111-3. PubMed ID: 7526219
    [Abstract] [Full Text] [Related]

  • 17. RNA simulations: probing hairpin unfolding and the dynamics of a GNRA tetraloop.
    Sorin EJ, Engelhardt MA, Herschlag D, Pande VS.
    J Mol Biol; 2002 Apr 05; 317(4):493-506. PubMed ID: 11955005
    [Abstract] [Full Text] [Related]

  • 18. Contribution of the closing base pair to exceptional stability in RNA tetraloops: roles for molecular mimicry and electrostatic factors.
    Blose JM, Proctor DJ, Veeraraghavan N, Misra VK, Bevilacqua PC.
    J Am Chem Soc; 2009 Jun 24; 131(24):8474-84. PubMed ID: 19476351
    [Abstract] [Full Text] [Related]

  • 19. Understanding the thermodynamic stability of an RNA hairpin and its mutant.
    Singh SB, Kollman PA.
    Biophys J; 1996 Apr 24; 70(4):1940-8. PubMed ID: 8785353
    [Abstract] [Full Text] [Related]

  • 20. Mutational and structural analysis of stem-loop IIIC of the hepatitis C virus and GB virus B internal ribosome entry sites.
    Rijnbrand R, Thiviyanathan V, Kaluarachchi K, Lemon SM, Gorenstein DG.
    J Mol Biol; 2004 Oct 29; 343(4):805-17. PubMed ID: 15476802
    [Abstract] [Full Text] [Related]

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