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Journal Abstract Search

207 related items for PubMed ID: 14579350

  • 1. Assessment of progress over the CASP experiments.
    Venclovas C, Zemla A, Fidelis K, Moult J.
    Proteins; 2003; 53 Suppl 6():585-95. PubMed ID: 14579350
    [Abstract] [Full Text] [Related]

  • 2. Protein structure prediction of CASP5 comparative modeling and fold recognition targets using consensus alignment approach and 3D assessment.
    Ginalski K, Rychlewski L.
    Proteins; 2003; 53 Suppl 6():410-7. PubMed ID: 14579329
    [Abstract] [Full Text] [Related]

  • 3. A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction.
    Moult J.
    Curr Opin Struct Biol; 2005 Jun; 15(3):285-9. PubMed ID: 15939584
    [Abstract] [Full Text] [Related]

  • 4. A "FRankenstein's monster" approach to comparative modeling: merging the finest fragments of Fold-Recognition models and iterative model refinement aided by 3D structure evaluation.
    Kosinski J, Cymerman IA, Feder M, Kurowski MA, Sasin JM, Bujnicki JM.
    Proteins; 2003 Jun; 53 Suppl 6():369-79. PubMed ID: 14579325
    [Abstract] [Full Text] [Related]

  • 5. Modeling three-dimensional protein structures for CASP5 using the 3D-SHOTGUN meta-predictors.
    Sasson I, Fischer D.
    Proteins; 2003 Jun; 53 Suppl 6():389-94. PubMed ID: 14579327
    [Abstract] [Full Text] [Related]

  • 6. CASP5 assessment of fold recognition target predictions.
    Kinch LN, Wrabl JO, Krishna SS, Majumdar I, Sadreyev RI, Qi Y, Pei J, Cheng H, Grishin NV.
    Proteins; 2003 Jun; 53 Suppl 6():395-409. PubMed ID: 14579328
    [Abstract] [Full Text] [Related]

  • 7. CAFASP3: the third critical assessment of fully automated structure prediction methods.
    Fischer D, Rychlewski L, Dunbrack RL, Ortiz AR, Elofsson A.
    Proteins; 2003 Jun; 53 Suppl 6():503-16. PubMed ID: 14579340
    [Abstract] [Full Text] [Related]

  • 8. Comparative modeling in CASP5: progress is evident, but alignment errors remain a significant hindrance.
    Venclovas C.
    Proteins; 2003 Jun; 53 Suppl 6():380-8. PubMed ID: 14579326
    [Abstract] [Full Text] [Related]

  • 9. Structure-based evaluation of sequence comparison and fold recognition alignment accuracy.
    Domingues FS, Lackner P, Andreeva A, Sippl MJ.
    J Mol Biol; 2000 Apr 07; 297(4):1003-13. PubMed ID: 10736233
    [Abstract] [Full Text] [Related]

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  • 11. Hidden Markov models that use predicted local structure for fold recognition: alphabets of backbone geometry.
    Karchin R, Cline M, Mandel-Gutfreund Y, Karplus K.
    Proteins; 2003 Jun 01; 51(4):504-14. PubMed ID: 12784210
    [Abstract] [Full Text] [Related]

  • 12. Predictions without templates: new folds, secondary structure, and contacts in CASP5.
    Aloy P, Stark A, Hadley C, Russell RB.
    Proteins; 2003 Jun 01; 53 Suppl 6():436-56. PubMed ID: 14579333
    [Abstract] [Full Text] [Related]

  • 13. Assessment of CASP8 structure predictions for template free targets.
    Ben-David M, Noivirt-Brik O, Paz A, Prilusky J, Sussman JL, Levy Y.
    Proteins; 2009 Jun 01; 77 Suppl 9():50-65. PubMed ID: 19774550
    [Abstract] [Full Text] [Related]

  • 14. Application of 3D-Jury, GRDB, and Verify3D in fold recognition.
    von Grotthuss M, Pas J, Wyrwicz L, Ginalski K, Rychlewski L.
    Proteins; 2003 Jun 01; 53 Suppl 6():418-23. PubMed ID: 14579330
    [Abstract] [Full Text] [Related]

  • 15. Assessment of CASP7 predictions in the high accuracy template-based modeling category.
    Read RJ, Chavali G.
    Proteins; 2007 Jun 01; 69 Suppl 8():27-37. PubMed ID: 17894351
    [Abstract] [Full Text] [Related]

  • 16. Relationship between multiple sequence alignments and quality of protein comparative models.
    Cozzetto D, Tramontano A.
    Proteins; 2005 Jan 01; 58(1):151-7. PubMed ID: 15495137
    [Abstract] [Full Text] [Related]

  • 17. Fold recognition and accurate sequence-structure alignment of sequences directing beta-sheet proteins.
    McDonnell AV, Menke M, Palmer N, King J, Cowen L, Berger B.
    Proteins; 2006 Jun 01; 63(4):976-85. PubMed ID: 16547930
    [Abstract] [Full Text] [Related]

  • 18. 3D-SHOTGUN: a novel, cooperative, fold-recognition meta-predictor.
    Fischer D.
    Proteins; 2003 May 15; 51(3):434-41. PubMed ID: 12696054
    [Abstract] [Full Text] [Related]

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  • 20. Estimating quality of template-based protein models by alignment stability.
    Chen H, Kihara D.
    Proteins; 2008 May 15; 71(3):1255-74. PubMed ID: 18041762
    [Abstract] [Full Text] [Related]

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