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Journal Abstract Search

481 related items for PubMed ID: 14693809

  • 1. An iterated loop matching approach to the prediction of RNA secondary structures with pseudoknots.
    Ruan J, Stormo GD, Zhang W.
    Bioinformatics; 2004 Jan 01; 20(1):58-66. PubMed ID: 14693809
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  • 4. ILM: a web server for predicting RNA secondary structures with pseudoknots.
    Ruan J, Stormo GD, Zhang W.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W146-9. PubMed ID: 15215368
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  • 6. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment.
    Xu X, Ji Y, Stormo GD.
    Bioinformatics; 2007 Aug 01; 23(15):1883-91. PubMed ID: 17537756
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  • 9. High sensitivity RNA pseudoknot prediction.
    Huang X, Ali H.
    Nucleic Acids Res; 2007 Aug 01; 35(2):656-63. PubMed ID: 17179177
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  • 10. Dynamic matching algorithm for viral structure prediction.
    Li H, Zhu D, Zhang C, Liu Z, Han H, Xu Z.
    Pak J Pharm Sci; 2014 Jul 01; 27(4 Suppl):1001-4. PubMed ID: 25016258
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  • 11. Topology and prediction of RNA pseudoknots.
    Reidys CM, Huang FW, Andersen JE, Penner RC, Stadler PF, Nebel ME.
    Bioinformatics; 2011 Apr 15; 27(8):1076-85. PubMed ID: 21335320
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  • 14. Predicting a set of minimal free energy RNA secondary structures common to two sequences.
    Mathews DH.
    Bioinformatics; 2005 May 15; 21(10):2246-53. PubMed ID: 15731207
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  • 16. IPknot: fast and accurate prediction of RNA secondary structures with pseudoknots using integer programming.
    Sato K, Kato Y, Hamada M, Akutsu T, Asai K.
    Bioinformatics; 2011 Jul 01; 27(13):i85-93. PubMed ID: 21685106
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  • 17. FlexStem: improving predictions of RNA secondary structures with pseudoknots by reducing the search space.
    Chen X, He SM, Bu D, Zhang F, Wang Z, Chen R, Gao W.
    Bioinformatics; 2008 Sep 15; 24(18):1994-2001. PubMed ID: 18586700
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  • 18. ProbKnot: fast prediction of RNA secondary structure including pseudoknots.
    Bellaousov S, Mathews DH.
    RNA; 2010 Oct 15; 16(10):1870-80. PubMed ID: 20699301
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  • 19. An RNA folding algorithm including pseudoknots based on dynamic weighted matching.
    Liu H, Xu D, Shao J, Wang Y.
    Comput Biol Chem; 2006 Feb 15; 30(1):72-6. PubMed ID: 16321572
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  • 20. TurboFold: iterative probabilistic estimation of secondary structures for multiple RNA sequences.
    Harmanci AO, Sharma G, Mathews DH.
    BMC Bioinformatics; 2011 Apr 20; 12():108. PubMed ID: 21507242
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